Loxodonta africana (African savanna elephant): 100669796
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Entry
100669796 CDS
T04351
Symbol
SHH
Name
(RefSeq) LOW QUALITY PROTEIN: sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04340
Hedgehog signaling pathway
lav04360
Axon guidance
lav05200
Pathways in cancer
lav05205
Proteoglycans in cancer
lav05217
Basal cell carcinoma
lav05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100669796 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100669796 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100669796 (SHH)
05205 Proteoglycans in cancer
100669796 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
100669796 (SHH)
05217 Basal cell carcinoma
100669796 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lav01002
]
100669796 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lav00536
]
100669796 (SHH)
Peptidases and inhibitors [BR:
lav01002
]
Cysteine peptidases
Family C46: hedgehog family
100669796 (SHH)
Glycosaminoglycan binding proteins [BR:
lav00536
]
Heparan sulfate / Heparin
Morphogens
100669796 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Peptidase_M15_3
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
100669796
NCBI-ProteinID:
XP_023395567
LinkDB
All DBs
Position
Unknown
AA seq
269 aa
AA seq
DB search
MDEMLLLARCLVVVLVSTLLMCSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAGRERKLLCQETKHRMRAAQPTPAWRKPHFSFFRVASAKKVCKMYVWXRLP
PSLMTKDISIPVKTCIGMYLKLLSLCCLV
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatgctgctgctggcgagatgtctggtggtggtcctggtctccacgctcttg
atgtgctcagggctggcgtgcggacccggcaggggatttgggaagaggagacaccccaaa
aagctgacccctttagcctacaaacagtttatccccaatgtggccgagaagaccctaggg
gccagtggaagatacgaagggaagatctcgagaaactccgagcgatttaaggaactcacc
cccaattacaaccctgacatcatatttaaggatgaagaaaacaccggagcggaccggctg
atgactcagaggtgtaaggacaaactgaacgccttagccatctcggttatgaaccagtgg
ccaggagtgaagctgcgcgtgaccgagggctgggacgaggacggtcatcactcggaggag
tcgctgcactacgagggccgcgcggtggacatcaccacgtcggaccgcgaccgcagcaag
tacggcatgctggcccgcctggccgtagaggccggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctcggtgaaagcaggtagagaaaggaagctactttgtcaagaa
actaaacacaggatgagagctgcccagcccactccagcctggagaaaacctcacttttcc
tttttcagggtcgccagtgccaagaaagtgtgtaaaatgtatgtgtggtgacgactgcca
ccctctctcatgactaaggatatatctattcctgtcaaaacgtgtattggaatgtacttg
aaattgttgtctttgtgctgtcttgtttga
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