Loxodonta africana (African savanna elephant): 100669813
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Entry
100669813 CDS
T04351
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100669813 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lav01007
]
100669813 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lav03016
]
100669813 (VARS2)
Enzymes [BR:
lav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100669813 (VARS2)
Amino acid related enzymes [BR:
lav01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100669813 (VARS2)
Transfer RNA biogenesis [BR:
lav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100669813 (VARS2)
Prokaryotic type
100669813 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
100669813
NCBI-ProteinID:
XP_003422517
UniProt:
G3TEN1
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MFHLPLASFRPPLWGLRPSRGLPRPRPLSTQSEPHGSPISRRNREAKQKRLQERQAALEA
GISGKNKPPAESSKAWTPKEIVLYEVPTEPGEKKDVSRPLPPAYSPQYVEAAWYPWWVRE
GFFKPEYKAQLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWV
PGSDHAGIATQAVVEKQLWKEQGLRRHELSREAFLREVWKWKEEKGGEICEQLRVLGASL
DWDRECFTMDAGSSVAVTEAFVRLYKAGLLYRNRQLVNWSCALRSAISDIEVESRALPGH
TQLQLPGCPVPVSFGLLVFIAFPVDGEPDAEVVVGTTRPETLPGDVAVAIHPDDSRYTHL
HGRQLRHPLTGHLLPLITDSAVQPHVGTGAVKVTPAHSPADAEMGARHGLSPQSVIAEDG
TMTLLCGDWLQGLHRFVAREKIMCVLRERGLFRGLQSHPMVLRICSRSGDVVECLLKSQW
FVRCREMGDQAAKAVESGALGLHPPYHQKNWQHWFSHIGDWCISRQLWWGHQIPAYLVVE
EQTENVGEGCWVVGRSEAEARQAAAELTGRPGEELTLERDPDVLDTWFSSALFPFSALGW
PQETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGRKM
SKSLGNVLDPRDIISGAELQVLQEKLKDGNLDPAELAIAAAAQRKDFPHGIPECGTDALR
FTLCSHGALGGDLNLSVTEVLSSRHFCNKIWNALRFILNVLGEKFTPQPAEELSPSSPVD
AWILSRLALTARECERGFRTCELSLVTHTLHHFWLHNLCDTYLEAVKPVVARSPCPSGPP
QILFSCADVGLRLLAPLMPFLAEELWQRLPTRPGCASAPSICVAPYPSACSLEHWHQPEL
ERCFSRVQEAAQALRALRATYQLTKARPRVLLQSSEQSKQGLFEAFLEPLGTLGHCGAVG
LLPPGMAAPSGWAQAPLSDGIQIFMELQGLVDPQTHLPLLAARRHKLQKQLENLLTRTPS
QGEAETQRQQRLSSLQVELSKLDKAASHLQQLMEESQLREC
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatttgcctctggcctcttttcgaccgccactttgggggctgaggccatcacgg
ggcctccccaggcctcggcctctttccacccagtcagagccccatggatcccccatctcc
cggaggaaccgtgaagcaaaacagaagcgcctacaggaaaggcaggctgcactggaggct
ggaataagtgggaagaacaagccacctgcagaatccagtaaggcctggactcctaaggag
atagtcctatatgaagttcctacagaacccggtgaaaagaaagatgtctccaggcccctg
cctcctgcatacagcccccaatatgttgaggctgcctggtacccctggtgggtgcgagag
ggctttttcaaaccagaatataaggctcagctgccccaagccacaggggagaccttttcc
atgtgtatcccaccccccaatgtcactggctctctgcacattggccacgcactcacggta
gccatacaggatgccctggtgcgctggcaccggatgcgtggggatcaggtgctctgggtc
cctggttcggatcatgcaggaatagctacacaagctgtggtggagaaacagctatggaag
gaacagggcctgaggaggcatgagctgagccgggaagccttcctgagggaggtgtggaag
tggaaggaggagaaaggtggggagatctgtgagcagctccgcgtgctgggggcctccttg
gactgggatcgagagtgcttcaccatggacgctggctcctcagtggctgtgactgaagct
tttgtgcgactctacaaggcggggctgttgtaccggaaccggcagcttgtcaactggtca
tgtgctttacgatcagccatctcggatattgaggtggagagccgggccctgccgggccac
acacagcttcaactgcctggctgccctgtcccggtttctttcggcctccttgttttcatt
gcttttcctgtggatggagagcctgatgctgaggtcgtggtaggaaccacaaggccagag
acgttgcctggagatgtggctgtggccatccaccctgatgactcccgatacacacatcta
catgggcggcaacttcgtcaccccttgactgggcaccttctccctctcatcacagactct
gctgtccagccacacgtgggcacaggggcagtgaaggtgactccggcccatagccctgct
gatgctgagatgggagcccggcatggcttgagcccccagagtgtcattgcggaggatggg
accatgaccttgctctgcggggactggctgcagggtcttcaccggtttgtggcccgggag
aaaattatgtgtgtgctgagggagcgggggctgttccggggccttcaaagccaccccatg
gtgctgcgcatctgcagccgatccggggatgtggtagaatgcctgctgaagagccagtgg
tttgtccgctgccgggaaatgggggaccaggccgccaaggctgtggagtccggggccctg
gggctccatccaccctaccaccagaagaactggcagcactggttttcccacattggggac
tggtgtatctcccggcagctgtggtggggccatcagatcccagcctacctggtggtagag
gagcagacagagaacgttggggaaggctgttgggtagtcgggagatcagaggctgaggcc
agacaggcagctgcagaactgacagggaggccaggggaagagctaaccctggagagggac
cctgacgtcctggacacatggttctcttcagctcttttccccttttctgctctgggctgg
ccgcaagagactcctgacctcgctcgtttctaccccctgtcacttttggagacgggcagt
gacctcctgctgttctgggtgggccgcatggtcatgttggggacccagctgacagggcag
ctccccttcagcaaggtgcttcttcactccatggttcgggatcgacagggccggaagatg
agcaagtccctggggaatgtcctggacccacgggacatcatcagtggggcggagctgcag
gtgctgcaggagaagctgaaggatgggaacctggaccctgcagagctggcgatcgcagct
gcagcacagagaaaggacttccctcacgggatccccgagtgtgggacagacgccttgaga
tttacactgtgctcccatggagccctggggggtgacctgaacctgtctgtcactgaggtc
ctgagctcccgacatttttgcaacaagatctggaatgccttgcgctttatcctcaatgtc
ctgggggagaaattcacaccccagcctgcagaggagctctctccctcatcccctgtggat
gcctggatcctgagccgcctcgccctcaccgcccgggagtgtgagcggggcttccgcacc
tgcgagctctcgcttgtcacccacacgctgcatcacttctggctccacaacctatgtgac
acctacctggaggcagtgaagccagtggtggcacgttccccctgcccctcggggccacct
cagatcctgttctcctgtgctgacgttggcctccgcctccttgccccgctgatgcccttc
ctggccgaggagctctggcagcggctgcccaccaggccgggctgcgcctccgctcccagc
atctgtgttgccccttaccccagtgcctgcagcttggaacactggcaccagcctgagcta
gagcggtgcttctcccgggtccaggaggctgcgcaggcgcttcgggctctccgagccaca
taccagcttaccaaggcccggccccgagtgctgctgcagagctcggagcagagcaagcag
ggcctctttgaggccttcctggagcccctgggcaccctgggccactgtggggccgtgggc
ctcctacccccaggcatggcagctccctccggctgggcccaggctccactcagtgatggc
attcagattttcatggagctgcagggattggtggacccccagacccatctaccactgctg
gcagcccgaagacacaagttgcagaagcagcttgagaacctcctaactcggaccccatcc
cagggggaggcagagacgcagaggcagcaaaggctttcttccctccaagtggagttgtcg
aaactagacaaggcagcctctcacctgcagcagctgatggaggagtctcagctccgggag
tgctga
DBGET
integrated database retrieval system
