Loxodonta africana (African savanna elephant): 100669903
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Entry
100669903 CDS
T04351
Symbol
VARS
Name
(RefSeq) LOW QUALITY PROTEIN: valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100669903 (VARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lav01007
]
100669903 (VARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lav03016
]
100669903 (VARS)
Enzymes [BR:
lav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100669903 (VARS)
Amino acid related enzymes [BR:
lav01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100669903 (VARS)
Transfer RNA biogenesis [BR:
lav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100669903 (VARS)
Prokaryotic type
100669903 (VARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
Jag_N
Motif
Other DBs
NCBI-GeneID:
100669903
NCBI-ProteinID:
XP_003422316
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPPPTSRTPFPPPRLPAL
EQGPGGLWVWGATAVAQLLWPAGLGGPGGSQAAVLVQQWVSYADTELIPAACGATLPALG
LRSSAQDPQAALGALGRALSPLEEWLRLHTYLAGEXPTLADLAAVTALLLPFRYVLDPSA
RRIWGNVTRWFITCVQQPEFRAVLGEVVLYSGARPLSQQTGPEAPAPPKTAAQLKKEAKK
REKLEKFQQKQKIQQQPPSGEKKPKPEKKEKRDPGVITYDIPTPPGEKKDVSGTMPDSYS
PQYVEAAWYPWWEQQGFFKPEYGRSSVSAPNPQGVFMMCIPPPNVTGSLHLGHALTNAIQ
DSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWHEQGLSRHQLGRQAFLQEVWKWKE
EKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVTEAFVRLHEEGVIYRSTRLVNWSCTL
NSAISDIEVDKKELPGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDNGEEVVVATTRIETM
LGDVAVAVHPKDPRYQHLKGKSVVHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDY
DVGQRHGLEAISIMDSRGALINVPPPFLGLPRFEARKAVLAALKEQGLFRDIKDNPMVVP
LCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDWCI
SRQLWWGHRIPAYFITIDDPAVPPGEDPDERYWVSGRNEGEALEKAAKEFGMSPDKISLQ
QDEDVLDTWFSSGLFPFSILGWPDQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLT
GRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVILGVSLQGLHDQLLNSNLDPSEVEK
AKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFAL
RGLGKDFVPSPTSEPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLYE
LCDVYLECLKPVLNGADQVAVNCARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTPQ
AAPSLCVTPYPEPLECSWKDPEAEAAFELALSITRAVRSLRADYNLTRIRPDCFLEVADE
TTGAQASAVSAYVQTLASAGVVAVLALGAPAPQGCAVALASDRCSVHLQLQGLVDPAREL
GKLQAKRGEVQRQAQRLQERRAAPGYPAKVPLNVQEADKAKLQQTEAELRKVDEAIALFK
KML
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctctacgtctcccctcacccagacgccttccccagcctccgagccctcata
gccgcccgctatggggaggctggagagggtcccggatgggggggtgcccaccctcgcatc
tgtcttcagccccccccgaccagcaggactccctttcccccaccccgcctgcccgccctg
gagcaagggccaggtgggctctgggtgtggggggccacagctgtggcgcagctgctgtgg
ccagcaggcctagggggccctgggggtagccaggcagcagtccttgtccaacagtgggtc
agttatgccgacacggagctcataccagctgcctgtggggcaacactgccagccctggga
ctccgaagctctgcccaggacccccaggccgcactaggggccctgggccgggccctgagc
cccttggaggagtggcttcggctgcacacttacctggctggggagngccccactctggct
gacctggcagctgtcacagccttgctgctgcctttccgatacgtcctagacccctcagcc
cgccggatctggggtaacgtgactcgctggtttatcacgtgtgtccagcagccagaattc
cgggccgtgctgggagaggtggttctgtactcaggggccaggcccctctcccaacagaca
ggccctgaggctcctgcacccccaaagacagctgctcagctcaagaaagaggcaaagaaa
cgggaaaagctagagaaattccaacagaagcagaagatccaacagcagccaccttcaggg
gagaagaaacccaaaccagagaagaaggagaaacgggatcctggggtcattacctatgac
atcccaaccccacctggcgaaaagaaagatgtcagtggcaccatgcccgactcctacagc
cctcagtatgtggaggctgcctggtacccttggtgggagcagcagggcttcttcaaacca
gagtatgggcgttccagtgtgtcagcaccaaatccccaaggcgtcttcatgatgtgcatt
ccaccccccaatgtgacgggctccctgcacctgggccatgcgctcaccaacgccatccag
gactctctaacccgatggcatcgcatgcgtggggagaccaccctgtggaaccctggctgt
gaccacgcgggcattgccactcaggtggtggtggaaaagaaactgtggcatgagcagggg
ctgagccgacaccagctgggccgccaggcctttctgcaggaggtctggaagtggaaggag
gagaaaggtgaccggatttaccaccagctgaaaaagctcggcagctccttggactgggat
cgagcctgtttcaccatggaccctaaactctcagcagctgtgacagaggcctttgtccgg
ctccacgaggaaggagtcatctatcgcagcacccgtcttgtcaactggtcctgtaccctc
aactccgccatctctgacatcgaggtggataagaaggagttgccgggccgcacgctgctc
tctgtgcctggctacaaggagaaggtggagtttggggtccttgtctcctttgcctacaag
gtccaaggctcagacaatggcgaggaggtggtggtggcaacaactcgaattgagacgatg
ctgggcgacgtggctgtggctgtgcatcccaaagatcccagataccagcacctaaagggg
aagagtgtcgtccacccgttcctgtctcggagtctccccattgtctttgatgattttgtg
gacatggagtttggcacaggtgcggtgaagatcactcctgcacacgaccagaatgactat
gacgttgggcagcggcatgggctggaggccatcagcatcatggactcgcgtggggccctc
atcaacgtgcccccacctttcctgggcttgcccaggtttgaggccaggaaggcagtgctg
gcggcactgaaggaacagggattgttccgggacataaaggacaaccccatggtggtaccg
ctttgcaaccgttccaaggatgtggtggagcctctgcttcggccacagtggtatgtgcgc
tgtggggagatggcccaggctgccagtgctgccgttacgaggggtgacctccgcatcttg
cccgaggcccatcagcggacgtggcatgcctggatggacaacattcgggactggtgcatc
tcccggcagctgtggtggggccatcgcatcccagcttacttcatcaccatcgatgaccct
gctgtgccccctggggaggaccctgatgagcggtactgggtgagtgggcgcaacgaggga
gaggccctggagaaggcggccaaggagtttggcatgtctcctgacaagatcagtctccag
caagatgaggatgtgctggatacgtggttctcctctggcctcttccctttctccatccta
ggctggcctgaccagtcagaagacctgagtgtgttttacccggggacactgctggagacg
ggccacgacatcctgtttttctgggtagcccgaatggtcatgcttggcctgaagctcact
ggcaggctacccttccgagaggtctacctccatgccatcgtgcgagatgcccatggccgg
aagatgagcaagtctctaggcaatgtcatcgaccccctggatgtcatccttggagtctcc
ctgcaggggctccatgaccagttactgaacagcaacctggatcccagtgaggtggagaag
gctaaagaagggcagaaggcagacttcccggcagggattcctgagtgtggcaccgatgcc
ctccggtttggactctgtgcctacacgtcccaaggccgtgacatcaacctggatgtgaac
cggatattgggttaccgccacttctgcaacaagctctggaacgccaccaagttcgccctc
cggggccttgggaaggactttgtgccctcacccacctctgagcctggaggccacgagagc
ttggtggaccgttggatccgcagccggctgactgaagccgtgaggctcagcaaccaaggt
ttccaggcctacgatttcccagctgtcaccaccgcccagtatagcttctggctctatgag
ctctgtgacgtctacctggagtgcctgaagcctgtgctgaatggggcagaccaggtggca
gttaactgtgcccgccagaccctctacacctgcctggacgttggcctgcggctgctctca
cccttcatgcccttcgtgactgaggagctgttccagcggctgcctcggcggactccacaa
gctgcccctagcctctgtgttactccctacccagagcccttggagtgctcctggaaggac
cctgaggcagaagccgcctttgagctggcactaagcatcacgagagctgtgcgttccctg
cgtgctgactacaacctcacccgcatccggccagactgtttcctggaagtagctgacgag
accacaggtgcccaggcctccgccgtgtcagcctacgtgcagactttggccagcgcggga
gtggtagctgtcctggccctgggggctcctgctccacagggctgtgctgtggccctggcc
tctgaccgctgctccgtccacctgcagctgcaggggctggtggacccagcccgagagctg
ggcaagctgcaggccaagcgtggggaggtgcagcggcaagcccagcgtctgcaggagcgc
cgtgctgccccgggctacccagccaaggttcccctcaacgtccaggaggcagacaaagcc
aagctccaacagacagaagcagagctcaggaaggtggatgaggccattgccctattcaag
aagatgctgtga
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integrated database retrieval system
