Loxodonta africana (African savanna elephant): 100670011
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Entry
100670011 CDS
T04351
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lav03400
]
100670011 (PARPBP)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100670011 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
100670011 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD_C
MethyTransf_Reg
Motif
Other DBs
NCBI-GeneID:
100670011
NCBI-ProteinID:
XP_003405345
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MAVLYQTSVLDMIKEFRRNWHTLCSSERTTVCGADFMLLALQLSMAENNKQHSGEFSVSL
SDVLLTWKYLLHEKLNLPVENMEVTGHYEDIRKSYDDFLKNSNMLDLIDVYQKCRILTSN
CEKNDKISPSQLRDFLSGRQYAVDDETNLCVPTSPRSKPNQDNEKMRLLAKKIICSYLSL
LVNSKNDLALAHILNIPDRGLGREAFTDLKHAAQEKQMSIFLVATSFIRTIQLGGKGYAP
SLSDPLRTHVKGLSNFINFIDILGEILGEIPNPSIAGGRILSVIKTQLIKGQDSRDPFSK
SVEEVAQDLDLRIKNIIDSQQGDVAVHTTDISPARPKSHAINHGTAYCGRETVKTLLVLL
DEEAAEAPSRNKAELLYGDESRVRYNGTSILTLFRSPTQVNNSSMKPLRERIQKSMQEKK
VKVKQTLIRSQFACTYKDECMISKDKWNSVNSASKPLCVLRMENDPPEGVNSSVGRPTIG
TSSGNVHLDRSKNKKIQKKSSSQTGNENSKRKQVDLDGEHVFCDNGNELLQQKNTKIPKT
SKDSQNTLDGKLARTAKGNKCTAREKLIAGQTKLTQFFRL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctttaccagacgtccgtcttggatatgatcaaagagtttagacggaattgg
cacactctttgtagctctgagcgaactactgtatgtggtgcagacttcatgctcttggca
ttgcagctttccatggcagagaacaacaaacagcacagtggagaattttcagtctctcta
agtgatgtattattgacctggaaatacttactacatgagaaattgaacttaccagttgaa
aatatggaagtgactggccattatgaggacattaggaagtcttacgatgatttcttgaag
aatagtaatatgttagatctgattgatgtttatcaaaaatgtaggattttgacttctaat
tgtgaaaagaatgacaagatatcccctagtcaactacgggattttctgtctggcagacag
tatgcagtagatgacgaaaccaatctttgtgtgccgacatcaccaaggagtaaacccaac
caggataatgaaaagatgcgattactagccaagaaaattatctgttcatatttgagccta
ctagtcaattcgaagaatgacctggctttggctcacattcttaatattcctgatagagga
cttggaagagaagccttcacagacctgaagcatgctgctcaagagaaacagatgtctatc
tttttggtggccacgtcattcattcgaacaatacagcttggggggaaaggatatgcacca
tcactctctgatcctttaaggacacatgtaaagggattgtctaattttattaatttcatt
gacatattaggtgagattcttggagaaatcccaaatccaagcattgcagggggtcggata
ctctcagtgataaagacgcagcttattaaaggccaggacagcagggatcctttcagtaag
tcagtagaggaagttgctcaggatttggatttgaggattaaaaatattattgattctcaa
caaggagatgtagctgttcacaccactgacatcagccctgcacggccaaaatcacatgcc
ataaaccatggcacagcctactgtggcagagagactgtgaaaactttactagttctttta
gatgaagaagctgctgaagctccttccagaaacaaagcagaactcttatatggtgatgaa
agtagagttcgttataatggaacttctattcttacccttttcagatctcctacacaagtg
aataattcatcgatgaaacccctaagagaacgcatccagaagtcaatgcaagagaagaaa
gttaaggtaaagcaaaccttaattagatcccagtttgcttgtacttacaaagatgagtgc
atgataagcaaggataaatggaatagtgttaattcagcatcaaagcccctatgtgttctt
cgcatggaaaatgaccctcctgaaggtgtaaattcatctgttggaagaccaacaattgga
acaagttctggaaatgttcatttggacagaagtaaaaataaaaaaatacaaaaaaaatca
agtagtcagacaggaaatgagaactcaaaaaggaaacaggtggatttggatggcgaacat
gttttctgtgataatggaaatgaattacttcaacagaaaaatactaagatacctaagaca
tcaaaggattcgcagaatacattggatggcaaactagctcgaacagcaaaaggcaacaag
tgtaccgccagggagaaattgattgctggccagacaaagttaactcagttttttagacta
tga
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