Loxodonta africana (African savanna elephant): 100670068
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Entry
100670068 CDS
T04351
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03013
Nucleocytoplasmic transport
lav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100670068
03015 mRNA surveillance pathway
100670068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100670068
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100670068
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100670068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100670068
NCBI-ProteinID:
XP_003417124
UniProt:
G3SYK5
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSNLHLKEEKIKPDANGAVVKTNANAEKTDEEEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPTNRHPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccacagactcgtgggccctggcggtggacgagcaggaagcagcggctgagtcgttg
agcaacttgcatcttaaggaagagaaaatcaaaccagatgccaatggtgctgttgtcaag
accaatgctaatgcagagaagacagatgaagaagaaaaagaggacagagctgcccagtcc
ttactcaacaaactaatcagaagcaaccttgttgataacacaaaccaggtggaagtcctg
cagcgggatccaaattctcccctttactctgtgaagtcttttgaagagctccggctgaaa
ccacagcttctccagggagtctatgccatgggcttcaaccgtccgtccaagatacaagag
aatgcattgcctttgatgcttgctgaacccccacagaacttgattgcccagtctcagtcg
ggtactggtaaaacagctgcctttgtgttggccatgctcagccaagtagaacccacaaac
agacatccccagtgtttgtgcctctctccgacatacgagcttgcacttcaaacgggaaaa
gtgattgaacagatgggcaaattttaccctgaactcaagctagcttatgctgttcgaggc
aataaattggaaagaggtcagaagatcagtgagcagattgtcattggcacccctgggact
gtcctggactggtgttccaagctcaagttcattgaccccaagaagatcaaggtgtttgtt
ctagatgaggccgatgtgatgatagctactcagggccaccaagatcagagcatccgcatc
caaaggatgctgcccaggaactgtcagatgctgcttttttctgccacctttgaagattct
gtgtggaagtttgcccagaaagtggtcccagacccaaatattatcaaattgaagcgtgag
gaggagacattggacaccatcaagcagtattacgtcctatgcaataacagagatgagaag
ttccaggccttgtgcaacctctacggggccatcaccattgctcaagccatgatcttctgc
catacacgcaagacagctagttggctggcagcagagctctcaaaagaaggccaccaggtg
gctctgctgagtggtgaaatgatggtggagcagagagctgcagtaattgagcgcttcaga
gaaggcaaagagaaggttctggtgaccaccaatgtgtgtgcccgtggtattgatgtggaa
caagtgtctgtcgtcatcaactttgaccttcccgtggacaaggatgggaacccggacaac
gagacctacctgcaccggatcgggcgcactggccgctttggcaagaggggcctggccgtg
aacatggtagacagcaagcacagcatgaacatcctgaacaggatccaggagcattttaat
aagaagatagaaagattggacacagatgatttggatgagattgagaaaatcgccaactga
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