Loxodonta africana (African savanna elephant): 100670134
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Entry
100670134 CDS
T04351
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100670134 (SCAF4)
03041 Spliceosome [BR:
lav03041
]
100670134 (SCAF4)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100670134 (SCAF4)
Spliceosome [BR:
lav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
100670134 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100670134
NCBI-ProteinID:
XP_010588620
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All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDS
IVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEII
QPLLDMAAGTSNAAPVAESVTNNEGSPPPPVKVSSEPPQVTTNSVPTVPQLPSSDAFAAV
AQLFQTTQGQQLQQILQTFQQPPKPQSPTIDNAVMAQVQAITAQLKTAPTQPPEQKAAFP
PPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDPAATAAATTAPPAAAPPAPAAATPAAAA
APAASPPPQAPFGFPGDGIQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGF
GLLPTPPFPPMAQPGMPPAPPVQQPFQASFQAQSEPLTQKAHQQEMEVEQPCIQEVKRHI
SDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKER
ERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYI
VMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVK
PEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETAHTEPVSPIPKALPVPVPP
IPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPPPPPPPPFLRPG
FNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTV
VSGARGDAESGDSVKAYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTG
LLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFGMPPPHGMKGP
FPPHGPFVRPGGMPGLGGPGPGPGGPEERDGRQQQQQPPPPQPQQQQQPPPSQQPPPAQQ
QPQQFRNDSRQQFNSGRDQERFGRRSFGNRVENDRERYGSRNDDRDNSSRERREWGRRSP
DRDRHRDLEERNRRSSGHRDRERDSRDREPRREKEENRAKEKPEVTDRAGGNKVVEPPIS
QVGNVDTVSELDKEEPEATAVKPSEESPAEATSSVEPEKDSGSAAEAPR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggagctcttttcccttatggatatgaaacctcccatctctcgagccaagatgattctt
atcactaaagctgctattaaagctattaagctttataagcacgtagttcaaatagtagaa
aagttcatcaaaaagtgtaaaccagaatacaaggttccaggattatatgtaattgactca
attgtgaggcagtctcgtcatcaatttggaactgataaagacgtttttgggcctagattc
tctaaaaacataactgccacattccaatatttatatctttgtccatctgaagataagagt
aaaatagttcgtgtactgaacctttggcagaaaaatggagtatttaaaattgaaattatt
cagcctcttttggacatggcagcaggaaccagtaatgctgccccagtagcagaaagtgtt
actaataatgaaggttcaccgccgcctccagtaaaagtttcttctgaacccccccaagtc
actacaaactcagtaccaactgtgccacagttgcccagctctgatgcttttgctgctgtg
gcccaactgtttcagacaactcaagggcaacagcttcagcagatccttcagacctttcaa
caacctccaaaaccccagtctcccaccattgacaacgctgtgatggctcaggttcaggcc
atcacagctcagttaaagacagctccgacccagccacctgagcagaaagctgctttcccc
ccacctgagcagaagaccgcctttgacaagaagctgctggatagatttgactatgatgat
gagccagaggctgtggaagagtccaagaaagaagatcctgctgccaccgccgctgccacc
acggcccctccggctgccgcccctccagcccccgctgctgccacccctgccgctgctgcc
gctcccgctgcttctcctcctccacaggcaccatttggatttcctggtgatggcatacaa
cagccagcatatacacagcatcaaaatatggatcagtttcagcctcgaatgatgggaata
cagcaggatccaatgcaccatcaggttccacttcctcctaacggacagatgccagggttt
gggctccttcctacacctccgtttccacctatggcccagcccgggatgccgccggcccca
ccagtgcagcagcctttccaggcttctttccaggcacaaagcgagccgcttacacagaag
gcacatcagcaggaaatggaagtggaacaaccttgtattcaagaagttaaacggcatatt
tctgataacagaaagtcaagatctaggtcagcatccagatcaccaaaaagaagacgatct
agatctggttctagatctcgaagatctcgtcatcgacgttctcgatctcgatccagggat
agacgccgacactctcctaggtctcggtcgcaagaaagacgggatcgagagaaagagagg
gaacgccgacaaaaaggcctccctcaaatcaaaccagaaactgcaagtgtttgtagcact
acactctgggttggacagctggacaaacggacaacacagcaggatgttgccagtctcttg
gaagagtttggtccaattgagtcgattaatatgattcctcccaggggttgtgcctatatc
gttatggttcacaggcaggacgcttatcgggccctgcagaaactgagccgaggaaactac
aaagtgaaccagaagtccataaagattgcctgggccttaaacaaaggaataaaggcagat
tataagcagtattgggatgtagaacttggtgttacttatattccatgggacaaagtcaaa
cctgaggaactagagagtttttgtgaaggaggaatgttggacagtgatacacttaaccca
gattggaaaggaattcccaagaagcctgagaatgaagttgctcaaaatggaggtgcagaa
actgcccacacagagccagtatcacccatacctaaggctttgcctgttcctgtccctcct
attcctgttcctgcacctatcacagtaccacctccacaggtcccaccccatcagccgggt
ccccctgtagtgggtgcactccagccacctactttcacacctcctttgggaatcccgcct
ccaggctttggccctggcgttcctcctcctcctccacctccaccgtttttgcgcccagga
ttcaacccaatgcatttaccaccaggttttcttcctcctggacccccacctcctataact
ccaccagtatccattcctcctcctcacactccaccaataagcatcccaaactccactatc
gctggtataaatgaagacactacaaaagacttatctattggaaatcccattccaacagtg
gtgtctggggctagaggagacgccgagtctggtgacagtgtgaaagcctatggctctgcc
gtgccgcctgctgctcccacgaatctgcccacccctcctgtaacccagcctgtttcactt
cttggcactcaaggagttgcacctggtcctgtgattgggctccaagcaccatctactggt
ctccttggtgcccgacctggcctcatcccactccagcgccctccaggaatgcctccgcct
catctgcagcgatttcctttgatgccaccccgtcctatgccaccacatatgatgcataga
gggccaccgccaggaccagggggctttggaatgccgccaccacacgggatgaaaggtccc
tttccacctcatggcccctttgttaggcctgggggaatgccagggcttgggggcccaggc
ccgggcccagggggccctgaagagagagatggaaggcagcagcagcagcagccaccgcca
ccacagccccagcagcagcagcagccgccgccctcacagcagccaccaccagcccagcag
caaccacagcagtttagaaacgatagcaggcagcagttcaattcaggtagagaccaagaa
aggtttggaagaagatcttttggaaatagggtggaaaatgaccgggaacggtatgggagc
cgtaatgatgatagagataatagcagtcgtgaaaggagagagtggggaagaaggagccca
gaccgggacaggcacagagacttggaagagagaaatagacgctctagtgggcatcgagac
agagagagagattctagagatagagagcctcgtagagaaaaggaggagaaccgagcaaag
gaaaagcctgaggtgacagacagggcaggtggtaacaaagtcgttgaacctcccattagc
caagtgggaaatgtagacactgtttcagaacttgataaggaggagcccgaggccacagct
gtcaaaccttctgaagagtcacctgctgaggctacctcatccgttgaacctgaaaaggat
tctggctcagcagcagaggctcctcgttag
DBGET
integrated database retrieval system
