Loxodonta africana (African savanna elephant): 100670239
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Entry
100670239 CDS
T04351
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lav03041
]
100670239 (RBM39)
Spliceosome [BR:
lav03041
]
Common components
Common spliceosomal components
General mRNP proteins
100670239 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
100670239
NCBI-ProteinID:
XP_003411733
UniProt:
G3UFS3
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaaaagc
agaagccggagtcatgaacgaaagagaagcaaaagtaaggaacggaaacgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaagaaagcgaagtagaagcaaagaaaggaga
cggagccgctcaagaagccgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggag
cctattgataatttaactcctgaggaaagagatgcaaggactgttttctgcatgcagctg
gcagcaaggattcggccaagggatttggaagagtttttctctacagtaggaaaggttcgc
gatgtgaggatgatttctgatagaaattcaagacgttccaaaggaattgcttatgtggag
tttgtcgatgttagctcagtgcctctagctataggattaactggccagcgcgtcttagga
gtgccaatcatagtacaagcatcacaggcagaaaaaaacagagctgcagcaatggcaaat
aatcttcaaaagggaagcgctggacctatgaggctttatgtgggctcgttacactttaac
ataactgaggatatgcttcgggggatctttgaaccttttggaagaattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatccaagggatacggatttattacgttttctgat
tcagaatgtgccaaaaaggcattggaacagcttaatggatttgaactagctggaaggcca
atgaaagttggtcatgttactgaacgcactgatgcttccagtgctagttcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccaattgatg
gcaagacttgcagagggtacaggtttgcagattccgccagcagcacaacaggctctgcaa
atgagtggttctttggcctttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccagcagactgaagcttcagctttagctgcagctgcctctgttcagcca
cttgcaacacagtgtttccaactctcaaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagaaattaaggatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtatatgtgaagtgcccgtca
attgctgcagctattgctgctgtcaatgcgttgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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