Loxodonta africana (African savanna elephant): 100670492
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Entry
100670492 CDS
T04351
Symbol
RTTN
Name
(RefSeq) rotatin isoform X2
KO
K16484
rotatin
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lav03037
]
100670492 (RTTN)
Cilium and associated proteins [BR:
lav03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100670492 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
100670492
NCBI-ProteinID:
XP_003406301
LinkDB
All DBs
Position
Unknown
AA seq
2277 aa
AA seq
DB search
MPLILFMFPSDLSEPIVRPAGFPGGHYLWPDARRGGLILRRRLTELDAMVLTGLIRKLGH
QLAEIRERALRSILCKVEHNLICYADLIQERLLFLHLLEWFNFPSVPMKEEVLNLLNSLV
KYPPAVQHLVDLGAVEFLSKLRSNVEPNLQAAVDGVLDGLFILPSEVPTLPSTSYQANPT
EFSHKSETLTGYFPQDKSNFQQVEVPPRPVVNWTVKCLKFSAFPWLPLTTTDRHVLSSNE
SSLRSNNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQNLLSLLRLAVGGDGKHRLALQ
SVSCLQQLCMNLRNRLNFHRDPGFFSSKQDTISQNSSLSYCHEARGTHHSQNPSPGSSSP
RPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVDSRMSVPSPLDVGHMDLPELGAEDTLG
LQLQQLSLPQFCVSVLESAVPLLRTGSRLVIIRVLELLAEVIILTGDAVSAGIWDDSSLF
AMDMKERLLTVLESLGETMSHHKSSASWEQPEAMLVHHRMAFVSISLFTVRLLQILLPIE
KVSEFFPEPVSAALFLLSLDVPFSLEYPNVHEAVVAYLEQLNAENYSLYKRTAEAVYSIE
CTCNFMADVGKEGERNLLELLELADQALRSFSFHQHFPLIKEIICICSKIWKSAQASPLL
QGESQKVFLCLLAHPLLKVKVETYRCCLEIVKECLGVHNVTKPVSSVCNGIHFLLHPKVL
YEISTFGIQEPKNEVNAAAKAILMYLLQGRLGMTALTWNKFIESLCPIIPVLQGYADTED
TLGNCILFLSKVGSEAGEGVLPYTTWFKSVLRLLLVKKPPVRSLALKLLAFHLTNEDGAD
MKRPFIDAKVLSRVTNLFIVKKPIDLNLDDRREIIIKVETVEKVYEIFTSDDIDFVLRKS
AAEQLAVIMQDIKMHAVVKKLCLIDKIIEYLNKCVCQDGEVMECIIQPSLTLFRKVLCAD
PVLRVSLSQRPSLLTLLFRVSLIFHEDCAIVTEVGALFCLLLFDEVSRMDIWSVKPSSKS
SSPSLFSLPLSVIRRYHLPVHVRGHHAVSPNSIVLPLSADCLALKPVSDMLRVAWNLSWH
HGIDNLLNQMNSETKIQEFLGTLKLSVEDSLTLKITHTASGLQDCLHSIVRAAAHREVRA
AVTRMSFYLLNDRLSLKSGSGPCGVTLKSLAWHTALNRFLQVLPACTEDEKLLIDVIHFL
NKLMKERRENSSVELLNWILDLLLRHGPNPLLDLLVPTESQAREEEDDIRTAVRQQLQKE
LIALFNTLLLGFTAITDRKCLELLRVFHTQLALRLLQCLRVTDAPHFYGLPSLERTLRGM
AHLTAAPGWSAHSPLTKPLDICAKYLSGLLEVITSFYVERGGNAMSFMGKGVTKSTVLCL
LHLSHEMMTEAWSSDWMSLWFLPLGSPNEEHVSSQQGLAWLIPLWVDRDPEVRFTSLGLG
SALTTLEAGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFILQNLLVIPMPTE
IIKDYTWQGPCVHDEDSGMSLVGKPALQALLYHCHFYEHLNQMLQHCFLGRYTFDLNCSA
FDGTSEGSDLNGSDDSFKFWRAPSILSTHDQDPSSLSTSETMVTPSAGSTEFQPLVPAAT
LVSEASHDPFVVPGQHETTSPRPPHDSSFSALLPKQRVLVTPPLLSAMCSLLDNLLAIAP
RDTANALRQAHLIELLCGITDPALIEKCVQELRTPLPSSSPVEHTLAQLSFLLEYLSSVS
SLLQSCLLVDPDLVIQEELLKPLLTNTVRVLTICTKDVLDTELVSAFRRTWTHLFNLLAA
LLRKAGGVSLPYITVAMTRHWAVVTDMFCKCVGLSATCPTLYTASLQFLSIFLTEEAKRC
LQDKDKTNICHSPTVASLIDKTEENQNSLERLNEVILQCYEGKSSKDPLKRVAARALMSL
LAVSRRAQRHALKADLIDNCIEQMKHIHAQLNLDSLRPGKAALKKKEDGFIKELSTAMQL
LRNCLYQNEECKEAALEAHLVPVLHSLWPWLLMDDSLMQIALQLLCVYTANYPNGCSSLC
WSSYGQYPVQPACRGAASSSLMLCIMKLASQMPLENSAVQQTVFMFLSNLALSHDCKGVI
QKSNFLQNFLSLTLPKGGNKHLSNLTVLWLKLLLNISFGEDGQQMILRLEGCLDLLTEMS
KYKHKSSPYIPLLIFHNICFGPANKPKILANEKVITVLAACLESENQNAQRIGAAALWAL
SHNYQKAKATLKNPSIKRRVDEAYSLAKKTFSDSEESSLNAYYLRCLENLVQLLSSS
NT seq
6834 nt
NT seq
+upstream
nt +downstream
nt
atgccactcattctttttatgtttccctctgacctatcggaacccattgttcggccggcc
gggtttccggggggacattacttgtggccggacgccaggcgcggcggtttaattctccgg
cggcgactgactgagttggatgcgatggtcctgaccggactcattaggaaactcggtcat
cagctggccgagatcagggaacgcgccctgaggagtattctctgcaaggttgagcacaac
ttaatctgctacgctgatctcattcaggagaggctgctttttctccatttgctggaatgg
ttcaacttcccgtctgttccgatgaaagaagaggttttaaacttgctgaacagtttagtt
aagtatcccccagcagtccagcatttggttgaccttggtgccgtagagttcttatctaag
cttcgttctaacgtggagccaaatctgcaggctgcagttgatggtgttctggatggacta
tttattcttccttcagaagttccaacactgccttctacatcttaccaagccaatccgact
gagttttcacacaaatctgaaaccttgacagggtattttcctcaagacaaaagtaatttc
cagcaagtggaagtgcctccacgaccagtggtaaattggaccgtgaaatgtttgaagttt
tctgcgtttccttggctgcccctgaccacgacagacagacacgttctttcctctaacgaa
agctccttaagaagtaataaccacactttaatctggaatacttgtgaactcttgaaggat
gttatcatgcaagattttcctgctgagattttccttcaaaggcctaaaattgtccagaac
cttttatctctgctgaggctggctgttggaggagatgggaagcatcgcctggctctgcag
tccgtgtcttgcctgcaacagctgtgcatgaacttaaggaacagactcaactttcaccga
gacccaggctttttctctagtaaacaagacacaatttcccagaattcttctttgtcttac
tgtcatgaagccagaggtactcatcactcccagaacccttccccaggaagcagcagccct
cggccctctgtggttgggcgcacaggccagcgccctcgaggggatggccaggattgggat
gcagtgtcttccagtggaagcagtagtcatgctcatgtggactccaggatgtctgtccct
tctcccttggatgtggggcacatggacctgcctgagctgggtgctgaagacaccctggga
ctgcagcttcagcagctcagtctcccccagttctgtgtctctgttctggaatcagcagtt
cctcttttgaggacaggtagtaggctggtgataataagagttctggaattgcttgcggaa
gttattatcctcactggggacgcagtttcagcaggtatctgggatgacagcagccttttt
gctatggatatgaaggagagactgctcacagtgttggagtcactgggcgaaaccatgtcc
caccataagagcagtgccagttgggaacagccggaggcaatgctggtgcatcacagaatg
gccttcgtcagcatctcgctgtttacagtgcggctcttacaaatactgctccctatagaa
aaggtaagtgagttttttccagaacctgtgtcagcagcgttattccttctttctttggat
gtgcctttttctttggaatacccaaatgttcatgaagccgttgtggcctatttggagcag
ctgaatgctgaaaactacagtctttacaaaaggactgcagaggctgtgtattcaattgag
tgtacctgtaacttcatggctgatgttgggaaggagggagagaggaatctcttagaatta
ctggagctggcagaccaggccttgcgtagcttttcttttcatcagcattttcccctaata
aaggaaatcatctgcatttgttcaaagatctggaaatctgcacaggccagcccgttacta
caaggagaaagtcagaaggtgtttctgtgtttgttggctcatcccttgctgaaagtgaaa
gttgagacttaccgctgctgtctggaaattgttaaggaatgcttaggtgtccataatgtc
actaaacctgtgtcttcagtttgtaatgggattcattttctgcttcatccaaaagttctg
tatgaaatctccacatttggcattcaagaacccaaaaatgaggtgaatgctgctgccaag
gccattctgatgtacctgctgcagggacgcttggggatgaccgccctgacctggaacaag
ttcattgagtctctctgtcccatcattccagtgctgcagggctatgcagatacagaagac
actttaggtaactgcattctcttcctgagcaaagtgggttctgaggcaggagaaggggtt
ctaccctacacgacctggttcaagtctgtgctacggctcttactggtgaagaagccaccg
gtccgctccctagcattaaagcttttagcatttcatcttacaaatgaagatggggctgat
atgaaacgccctttcatagacgccaaggttctctccagagttactaatttatttattgtg
aaaaaacccatcgacctcaatttggatgacagaagagaaataattattaaggtggagact
gttgaaaaagtatatgaaatctttacctcagatgacattgattttgttttgagaaagtca
gctgcagagcagttagctgttattatgcaagatattaaaatgcatgctgtggtgaaaaag
ttatgcttaattgacaagataattgagtatttaaataaatgtgtatgtcaagatggggag
gttatggaatgcataatacaaccgagcctcacactgttccggaaagtgttatgtgctgac
ccagttctgcgtgtttccctctcacaaaggccttctctcctgaccctgttattcagagtt
tctttgatattccatgaagattgtgctattgtgacggaagtaggagcattgttttgtctt
ctattatttgatgaagtatcaagaatggacatatggtctgttaaaccttccagtaaatct
tcttcgccatcactcttcagtttgcctctttcagttattagaaggtatcacctcccagtg
catgtccgtggccatcatgctgtgagtccgaactccatagtcttgcctttatctgctgac
tgtttggccttgaagccggtgtcagatatgttaagagtagcttggaacctgtcatggcat
catgggattgacaatctgttgaaccaaatgaattcggaaactaaaatccaagaattttta
ggtacattgaagttatccgtagaggatagccttactctgaagataacacatacagccagt
gggctgcaggattgcctccattccattgttcgggctgcagcccacagggaagtcagggct
gctgtcactaggatgagtttttatcttctgaatgacagactgtctttaaagagtggcagt
ggcccatgtggggttaccttgaagtccttggcttggcacacagcactaaacaggttttta
caagtgcttcctgcttgcactgaagatgagaaactgttaatagatgtcatacatttttta
aataaattaatgaaggaacgaagggaaaattcatcagtagaacttctaaactggattcta
gatttacttcttagacacggtccaaacccactgttagacctgttggttccaacagagtca
caggcacgagaagaagaggatgacatccggaccgctgtcaggcagcagcttcagaaagaa
ctgatcgcccttttcaataccttgctgcttggtttcacagccatcacggacaggaaatgc
ttggagcttcttcgtgttttccacactcagttggctctgagactgctgcagtgtctgcga
gtgacggacgcccctcatttctatggcctgccttccctggagcggaccctgcggggcatg
gcccacctcactgcggctccaggctggagtgcgcactctccactgacaaagccacttgac
atttgtgccaagtacttgtcaggtctccttgaggttattacttctttctatgtggagcgt
ggagggaatgccatgtcctttatggggaaaggtgtcaccaagagcacagtgctttgccta
cttcacttatcgcatgagatgatgaccgaagcctggagctcggactggatgtcactttgg
tttttgcctttgggtagccccaatgaagagcatgtttcttctcaacaaggactggcttgg
ctgatcccgttatgggttgatcgggacccagaggtcagattcacctctctggggttagga
tcagcattaaccacccttgaagctggctgtgtagccctggcaaacagctgtcagaacatt
tctggtgggctctggggaactgtggtgaatattcttctggaccagtcggaatgtagtatg
gtgcgccgggaggctgcatttattcttcagaatctccttgtaattccaatgcctacagaa
attataaaggattatacatggcagggcccctgtgtccacgatgaggactctggcatgtca
cttgtaggaaaacctgccctccaggcccttttataccattgccatttttatgaacatttg
aatcagatgctacagcattgttttctaggacggtatacatttgatttgaattgctctgcc
tttgatggaacttcagaaggcagtgatttaaatggttcagacgactcattcaagttctgg
agggctccatctatattgtccactcatgatcaagatcccagctctctctccacctcggaa
acaatggtgacaccttcagcggggagtacagaatttcagccacttgtaccagcagcaacg
cttgtatccgaagcttctcatgacccgtttgtggttccaggtcagcatgaaactacatca
ccacggcctcctcatgattcatccttttctgctcttctgccaaaacagcgtgttttggtc
actccccctcttctttcagcaatgtgcagcctcttagacaacctgttggcaattgctcca
agagacactgcaaatgctcttcgacaagcccatctcatcgagctcctgtgtggtattaca
gatcctgccctcatagaaaagtgtgtccaggagctcaggacccccctgccttcctcgtct
ccagttgaacacactctggcccagctctccttcctcctggaatacctgtcctctgtgtcc
agtcttctgcagtcctgtttgctggtggaccctgacctcgtgattcaggaggagctcctg
aaacctctgctcacaaacaccgtcagggttctcaccatatgcaccaaagatgttttagat
acagagctggtatcagcttttcgtcgcacatggacacatttatttaaccttctggctgca
ctactgaggaaagctgggggtgtgtctctcccatatattacagtggctatgaccaggcac
tgggcagtggtgaccgatatgttctgcaaatgtgtgggtttgtctgccacatgtcctacc
ctgtatactgccagcctgcaattcctttctattttcttgactgaagaagcaaaaagatgt
ctccaggataaagataaaacaaatatatgccacagtccaacagtggcttcgcttattgat
aaaactgaggaaaatcagaactcgctagaacgacttaatgaagtaattcttcagtgctat
gaaggaaaatcctccaaagatcccctgaagagagttgctgcccgtgccttgatgtcgctc
ctggctgtcagcagaagggcacagagacacgctctgaaagctgatctcatagacaactgc
atagagcagatgaagcatattcatgcacaactgaacctagattccctgaggcctgggaaa
gcagccttgaaaaaaaaggaggatggttttattaaagagttaagcactgccatgcagctc
ctaagaaactgtctttatcaaaatgaagaatgtaaagaggcagctctcgaggctcatctt
gtccctgtcttgcactctctctggccttggcttttgatggatgattcactgatgcaaatt
gccctgcagttactttgcgtctatactgcaaattacccaaatggttgcagttctctttgt
tggtccagttatggacagtatcctgttcaacctgcatgtagaggggctgccagcagctcc
ctgatgctgtgcattatgaagttggcatcacagatgcctctggagaacagtgctgttcag
cagacggtattcatgttcctctccaacctcgccttgtctcatgactgcaaaggggtcatt
cagaagagcaacttcttacagaactttctgtctctaacattgccaaaaggaggaaataaa
catctcagtaacctgaccgttctgtggttgaagttactcctgaacatatcgtttggggaa
gatgggcaacagatgatcctgagactcgaaggctgtttggacttactcacggagatgagc
aagtacaagcacaagagcagtccctacatacctctccttatctttcacaatatttgcttc
ggtcctgctaataagcctaagatactggctaacgaaaaagtcatcactgtgctagctgcc
tgtctggaaagtgagaatcaaaatgctcagagaattggagctgctgcgctttgggctctg
agtcacaactatcagaaggcaaaagcaactttgaaaaatccgtcaataaaaagaagagtg
gatgaagcatattccttagcaaagaaaactttctcagactcagaagaaagctctctcaat
gcctattacttgcgatgtcttgaaaaccttgtgcagctgctcagctcctcctga
DBGET
integrated database retrieval system
