KEGG   Loxodonta africana (African savanna elephant): 100670731
Entry
100670731         CDS       T04351                                 
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X1
  KO
K11125  protein SMG5
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100670731 (SMG5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100670731 (SMG5)
   03032 DNA replication proteins [BR:lav03032]
    100670731 (SMG5)
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     100670731 (SMG5)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100670731 (SMG5)
DNA replication proteins [BR:lav03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    100670731 (SMG5)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 PIN_4
Other DBs
NCBI-GeneID: 100670731
NCBI-ProteinID: XP_023409851
LinkDB
Position
Unknown
AA seq 950 aa
MFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIGFYQHLL
LYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGDLSRYQN
ELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQSEVSFE
GAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVNFMYLQSLLQPKSSSVD
SELTSLCQSVLEDFNLCLFYLPSSPSLSLASEDEEEYESGYAFLPDLLIFQMVIICLMGV
HSLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQSDGTDEPESTES
LEKEEEPGPEPPPAAPQVGKVRKSRKISRLSCLRRRRHPPRAGDDSDLSEGFESDSSHDS
ARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDIEDEEGARSPALEPLRANS
EAPESLNGPLGPSEASMASNLQAMSTQMFQTKRCFRLAPTFSSLLLQPPTEPHDLAGCRP
CVNGGVGKPSEPASEEGSESEESESSGHSCRNERSTQEKLQVLMAEGLLSAVKVFLDWLR
TNPDLIIVCAQSSQSLWNRLSVLLNLLPAAGELQESGLALCPEVQDLLEGCELPDLPASL
LLPEDMALRNLPPLRAAHRRFNFDTDRPLLTALEESVVRVCCIRSFGHFVARLQGGILQF
NPEVGIFVSIAQSEQESLLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQLEGSLQQ
PKAQSAMSPYLVPDTQALCHHLPVIRQLATSGRFIVIIPRTVIDGLDLLKKEHPGARDGI
RYLEAEFKKGNRYIRCQKEVGKSFERHKLKRQDADAWTLYKILDSCKQLTLAQGAGEEDP
SGMVTIVTGLPLDNPSMLSGPMQAALQAAAHASVDIKNVLDFYKQWKEIG
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgttcctgcacccagtggactacgggaggaaggctgaagagctgctatggagaaaggta
tattatgaagttatccagcttatcaagactaacaaaaagcacatccacagcaggagcacc
ttggaatgtgcctacagaacacacctggttgctggtattggcttctaccagcatctcctt
ctttatatccagtcccactaccagcttgaactgcaatgctgcatcgactggacgcatgtc
accgaccccctcataggatgcaagaagccagtgtctgcctcagggaaggagatggactgg
gcacagatggcgtgccaccgatgtctagtgtacctgggggacttgtcacgatatcagaat
gaattagctggtgtagacactgagctgctagctgagagattttactaccaagccctgtca
gtagctccccagattggaatgcccttcaatcagctgggcacccttgcaggcagcaagtac
tacaatgtggaagccatgtactgctacctacgctgcatccagtcggaggtgtcctttgag
ggggcctatgggaaccttaagcggctgtatgacaaggcagccaaaatgtaccatcagctg
aagaagtgtgagactcggaaactctcaccaagcaagaagcgatgtaaagacattaagagg
ttactggtgaactttatgtatctacagagtctcctgcagcccaagagcagctcggtggat
tcagagctaacatcactttgccagtcggtcctggaggacttcaacctctgtctcttctac
ctgccctcctcacccagcctcagcctggccagtgaggatgaggaggagtatgagagcggc
tatgcttttctcccggacctgctcatctttcaaatggtcatcatctgccttatgggcgtg
cacagcttgaagagagcaggatccaagcagtacagtgcagccatcgccttcacgctggcc
ctgttctcccacctcgtcaatcacgtcaacatccggctgcaggctgagctggaagaaggc
gagaaccccgtgccggcattccagagcgacggcacggatgagccagagtccacggagtca
ctggaaaaagaggaggagccagggcctgagccacctccggcagcacctcaagtgggcaag
gtcagaaagagccgtaagatctcccgtctctcttgcctgcgccgccgccgccacccgccc
agagctggcgacgacagtgacctgagtgaaggctttgaatcggactcaagccatgactcg
gcccgggccagcgagggctcagacagcggctcagacaagagtcttgaaggtggaggaacg
gcttttgatgctgagacagactcggaaatgaacagccaggagtcccgatcagacttggaa
gatatagaggacgaggagggggcacgttccccagccctggagcccctgcgggccaactca
gaggctcctgagtccctcaatggtccactgggccccagtgaggccagcatggccagcaat
ctccaagccatgtccacccaaatgtttcagaccaagcgctgcttccggctggcccccacc
ttcagcagcctgctcctccagccccccactgaacctcacgacttggctggctgcaggccc
tgtgtcaacgggggtgtgggcaagccctcagagccagcctctgaggagggctctgagtca
gaggagagtgaatccagtggacactcgtgtcggaatgagcgcagcacccaggaaaagctg
caggtcctgatggctgaaggtctgctctctgccgtgaaagtcttcctggactggctgcga
accaaccccgacctcatcatcgtatgtgcgcagagctcccaaagtttgtggaaccgtctg
tctgtgttgctgaatctgttgccagctgctggcgagctccaggagtctggcctggctctg
tgccctgaggtccaggatcttcttgaaggctgtgagctgcccgacctgcccgcttccctg
ctgctgccagaggacatggcgctccgcaacctgcctcccctccgggctgcccacagacgc
tttaactttgacaccgatcggcccctgctcaccgccttagaggagtcggtggtacgtgtc
tgctgcatccgcagctttggccactttgtggctcgcctacagggcggcatcctacagttc
aacccagaggtcggcatcttcgtcagcatcgcgcagtccgagcaggagagcctgctgcaa
caggcccaggcccagttccggatggcacaggaggaagctcggcggaacaggctaatgaga
gacatggctcagctccgacttcagctcgaggtttcccagctggagggcagcctgcagcag
cccaaggcccagtcggccatgtctccctacctcgtccctgacacccaggccctctgccac
cacctcccagtcatccgccagctggccaccagtggccgcttcattgtcatcatcccaagg
actgtgatagatggcctggacctgctgaagaaggagcacccaggggcccgggatgggatc
cgctatctggaggcggagtttaaaaaaggaaacaggtacattcgctgccagaaagaagtg
ggcaagagctttgagcggcataagctgaagaggcaggatgcagatgcctggactctctat
aagatcctggacagctgcaagcagctgactctggcccaaggggcaggggaagaggaccca
agtggcatggtgaccattgtcacaggcctcccactggacaaccccagcatgctttcaggc
cccatgcaggcagccctgcaggccgctgcccacgccagcgtggacatcaagaatgttctg
gacttctacaagcagtggaaagagattggttga

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