Loxodonta africana (African savanna elephant): 100670926
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Entry
100670926 CDS
T04351
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04622
RIG-I-like receptor signaling pathway
lav05161
Hepatitis B
lav05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100670926 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100670926 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
100670926 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100670926 (DDX3X)
03041 Spliceosome [BR:
lav03041
]
100670926 (DDX3X)
03036 Chromosome and associated proteins [BR:
lav03036
]
100670926 (DDX3X)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100670926 (DDX3X)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100670926 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
100670926 (DDX3X)
Spliceosome [BR:
lav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100670926 (DDX3X)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100670926 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100670926
NCBI-ProteinID:
XP_003418028
UniProt:
G3TIS9
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGPRGRFDDRGRSDYDGIGSRGDRSGFSKYE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLEEYIFLAVGRVGSTSENITQKVV
WVEEPDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLESMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSGFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttcagataatcagagtggaggaagtacagccagtaaagggcgttatattcct
cctcacttaaggaacagagaagctactaaaggattctacgataaagacagttcagggtgg
agctctagtaaagataaggatgcatacagcagttttgggtcccgcagtgattcaagaggg
aagtctagtttcttcagcgatcgtggaagtggaccaaggggaagatttgatgatcgtgga
cggagtgactatgatggcattggcagtcgtggtgacagaagtggctttagcaaatatgaa
cgtggtggaaacagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactt
ccaccaagtgaacgcctggagcaggaactcttttctggaggcaacactgggattaacttt
gagaaatatgatgacattccagttgaagcaacaggcaacaactgtcctccacacattgaa
agtttcagtgatgttgagatgggagaaattattatgggaaacattgaacttactcgttat
actcgcccgactccagtgcaaaagcatgctattcctattatcaaggaaaaaagggacttg
atggcctgtgcccaaacagggtctggaaaaactgcagcatttctcttgcccatcttgagt
cagatttattcagatggtccaggcgaggctttgagggccatgaaggaaaatggaaggtac
gggcgccgcaaacagtaccccatttccttggtgttagcaccaacgagagaactggcagtt
cagatctatgaggaagccagaaaattttcataccgatctagagttcgtccttgcgtggtt
tatggaggtgctgatattggtcagcagattcgagacttagaacgtggatgccacttgtta
gtagccactccaggacgtctagtggatatgatggagagaggaaaaataggattagacttc
tgcaaatacttggtgttggatgaagctgataggatgttggatatgggatttgaacctcag
atacgtcgaatagttgaacaagatactatgccaccaaagggagttcgccacaccatgatg
tttagtgctactttccctaaggaaatacagatgcttgctcgtgatttcttggaagaatac
atatttttggctgtaggaagagttggctctacgtctgagaacatcacacagaaagtagtt
tgggtcgaagagccagacaaacggtcatttctgcttgaccttctaaatgcaacaggcaag
gattccttgaccttggtgtttgtggagacaaagaagggggcagattctctggaggatttc
ctgtaccatgaagggtatgcttgtaccagtatccatggagaccgatctcaaagagataga
gaagaggcccttcaccagttccgctctggaaaaagcccaattctagtggcaacagcagtg
gctgcaagaggactggacatttcaaatgtgaaacatgttatcaattttgacttgccaagt
gatattgaagaatatgtgcatcgcattggccgtacaggacgggtcggaaaccttggcctc
gccacttcgttctttaacgagaggaacataaatattaccaaggatttgttggatcttctt
gttgaagctaaacaagaagtgccatcttggttagaaagtatggcttatgaacaccactac
aaggggagcagtcgcggacgttctaagagtagcagattcagtggaggatttggcgccaga
gactaccgacaaagtagtggtgccagcagttccggcttcagtagcagtcgtgcaagcagc
agccgtagtggtggaggtggtcacggaagcagcagaggatttggaggaggtggctatgga
gggttttacaacagtgatggttatggaggaaattacaactcccaaggggttgactggtgg
ggtaactga
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