Loxodonta africana (African savanna elephant): 100671571
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Entry
100671571 CDS
T04351
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04390
Hippo signaling pathway
lav04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100671571 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100671571 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lav03000
]
100671571 (SOX2)
Transcription factors [BR:
lav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100671571 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100671571
NCBI-ProteinID:
XP_003412924
UniProt:
G3TQ64
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKM
AQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKKHPDYKYRPRRKTKTL
MKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYGVMQDQLG
YPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYTQQATPGMALGS
MGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQ
SGPVPGTAINGTLPLSHM
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggtggcggcggtaactccaccgcggcggcggcgggcggcaaccagaaaaacagcccggac
cgtgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcggcgcaagatg
gcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgccgagtgg
aaacttttgtcggagacggagaagcggccgttcatcgacgaagccaagcggctgcgcgcg
ctgcacatgaagaagcacccggattataaatatcggccccggcggaaaaccaagacgctg
atgaagaaggataagtacacgctgcccggcgggctgctggcgccgggcggcaacagcatg
gcgagcggagtcggggtgggcgccggcctgggcgcgggcgtgaaccagcgcatggacagc
tacgcgcacatgaacggctggagcaacggtagctacggcgtgatgcaggaccagctgggc
tatccgcagcacccgggcctcaacgcgcacggcgccgcccagatgcagcccatgcaccgc
tacgacgtgagcgcgctgcagtacaactccatgaccagctcgcagacctacatgaacggc
tcgcccacctacagcatgtcctacacgcagcaagccacccccggcatggctctcggctcc
atgggctcggtggtcaagtccgaggccagctccagcccccccgtggttacctcttcctcc
cattccagggcgccctgccaggccggggacctccgggacatgatcagcatgtacctgccc
ggcgccgaggtgccggagcccgccgcgcccagcagacttcacatgtcccagcactaccag
agcggcccggtgccgggcacggccattaacggcacactgcccctctcgcacatgtga
DBGET
integrated database retrieval system
