Loxodonta africana (African savanna elephant): 100671614
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Entry
100671614 CDS
T04351
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X2
KO
K20775
BRCA1-A complex subunit RAP80
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100671614 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lav03400
]
100671614 (UIMC1)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
100671614 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
UIM
zf-WRNIP1_ubi
Rad50_zn_hook
UIM_2
Motif
Other DBs
NCBI-GeneID:
100671614
NCBI-ProteinID:
XP_003404729
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MARRKKKVKEASESQNSEKRDAETSTSVGLKRKRRFEDAFIVISDSDGEEPKEENGLQKM
KTKQPNRAKCLAKRKIAQMTEEEQFALALKMSEQEAREVNSQEEEEEELLRKAIAESLNT
CRPSDASATSSRPLPIGPSSQSHQEKTTDSGTTEGVWQLVPPSLFKGSHISQGNEAEERE
EPWDHTENTEEEPVSGSSGSWDQSSQPVFENENVRCTGHLAEHTQCGKLQESTGRGCAQG
RGDTSRHCLPTPADARGFQGIGGTVQYFWGIPFCPAGVDPNQYTKVILCQLEVYQKSLKM
AQRQLLKKKVFGEPVLPRASSLIQNECGQGDQASEKNGGISEDMGDEDKEERQESRASVW
LSKPKDFRESPIKSLKEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPASQSIAALTGK
RSSVPMPESSAEEITICPETQLSSSETPDFEREVSPSSRETPDEVIIMADQEVGNREDAE
KEIPTSTFSSSNQVSCPLCNQGFPPTKIERHAMYCNGLMGQDTVLTRRQKEAKSKSKKDN
GTAAQTSPDIEQSEKCYLCKSFIPFREYQCHVDSCLQLAKGYQGDGPSGSDSICPVVEEK
QQQRLRSTKEKGRNEGRLLSLLEQSEQQSADAKIKSTSSETGAFRISSPGMEEAGCSREM
QSSLVHLDINDSPIKSFVSISEATDCLVDFKKQFTVRPGSRARTKAGRGRRRKS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaagaaagaaaaaagttaaggaagcctcggaatctcagaactcggagaagagg
gatgcagaaactagtacttctgtcggtttgaagaggaagcgtagatttgaggatgcattc
attgtgatatctgatagtgacggagaggagccaaaggaggagaatggattgcagaaaatg
aagacaaaacaaccaaacagagcaaagtgtttggctaaaaggaaaattgcacagatgaca
gaagaagaacagtttgctctggctctcaaaatgagtgagcaggaagccagggaggtaaac
agccaggaggaggaagaagaggagctcttgaggaaagctattgctgaaagcctgaatact
tgccggccttctgatgcctctgctaccagttctcgacctcttcccattggaccgtcttca
cagtcccaccaagagaaaaccacagactctgggaccactgaaggcgtatggcagctggta
cctccatcactgtttaaaggctcacatatcagtcagggaaacgaggctgaggaaagagag
gagccttgggaccacactgaaaacactgaagaggagccggtctctggcagctcaggaagc
tgggaccaatcaagccagccagtctttgagaacgagaacgttagatgtactggccacttg
gctgagcacacacagtgtgggaagctacaggaaagtactgggaggggctgtgcccagggt
aggggggacacatctaggcactgtctgcctaccccagcagatgccagaggtttccagggc
attgggggcactgtgcagtacttctggggtattccattctgccctgctggagtagaccct
aaccagtataccaaggtcattctctgccagttagaggtttatcaaaagagtcttaaaatg
gctcagaggcagctccttaaaaaaaaagtgtttggggaaccagtgttacctagggcgtct
tctctgatccaaaatgagtgtggccaaggagatcaggctagtgaaaaaaatggaggcatc
tcagaagatatgggagatgaagacaaagaggaaaggcaggagtctagggcatctgtctgg
ctctcaaaacccaaggatttccgagaaagcccaattaaaagcttgaaagagaaacttttg
ttggaggaagaaccaacaaccagtcatggtcagtcttcccaaggtctatttgttgaagaa
acttctgaagaaggaaactctgtacctgcgtcacagagcattgctgctttgaccggtaag
agaagctcagtccctatgccagagagttctgcagaagaaatcaccatttgccctgagaca
cagctaagttcctctgaaactcctgacttcgaaagagaagtttccccatctagcagagag
accccggatgaagtaataataatggcagatcaggaggttggtaacagagaagatgctgag
aaggaaatacctacttctaccttctcatccagtaaccaggtatcctgcccactgtgtaac
caaggcttcccacccacaaagattgagagacatgccatgtactgcaatggtctaatgggg
caagacacagtattgactcggagacaaaaagaggccaagagcaagagcaagaaagacaat
gggacagctgcccagacttctccagacattgagcagagtgagaagtgttatctctgtaag
tccttcatcccattcagagaatatcagtgtcacgtagactcctgtctccagcttgccaag
ggctaccaaggcgatgggccctcagggagtgatagcatatgcccagttgtggaggagaag
cagcagcagcggctgaggagcaccaaggaaaaaggccggaatgaaggccggctcctcagt
ctcttggagcagtctgagcagcagtctgcagatgccaagataaagagtacatcttcagaa
acaggagccttcaggatttcctcaccgggtatggaagaggcaggctgcagcagagagatg
cagagttcccttgtacatcttgacataaatgattctcccatcaagtcttttgtttccatt
tcagaagccactgattgcttagtagacttcaaaaagcaatttactgtccgtccaggtagc
cgggcacgtaccaaagcaggccggggaagaaggagaaaatcctaa
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