Loxodonta africana (African savanna elephant): 100672039
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Entry
100672039 CDS
T04351
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04820
Cytoskeleton in muscle cells
lav05169
Epstein-Barr virus infection
lav05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100672039 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100672039 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100672039 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100672039 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lav04812
]
100672039 (VIM)
04147 Exosome [BR:
lav04147
]
100672039 (VIM)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
100672039 (VIM)
Cytoskeleton proteins [BR:
lav04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
100672039 (VIM)
Exosome [BR:
lav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100672039 (VIM)
Exosomal proteins of other cancer cells
100672039 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF4515
TPR_MLP1_2
DUF573
Laminin_II
RBD-FIP
CENP-F_leu_zip
Sec10_N
GAS
Motif
Other DBs
NCBI-GeneID:
100672039
NCBI-ProteinID:
XP_003410611
UniProt:
G3TK83
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MSTRSMSSSSYRRMFGGPGTASRPSSNRSFVTTSTRTYSLGSALRPSTSRSLYTSSPGGV
FATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DITRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQEANEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaggtccatgtcctcatcctcctaccgccggatgttcggcggccccggcacc
gcaagccggcccagctccaaccggagcttcgtgaccacgtccacccgcacctacagcctg
ggcagcgcgctgcggcccagcaccagtcgcagcctctatacctcgtccccgggcggcgtg
ttcgccacgcgctcctcggctgtgcgcctgcggagcagcgtgcccggcgtgcgactgctg
caggactcggtggacttctcgctggccgacgccatcaacactgagttcaagaacacccgt
accaacgagaaggtggagctgcaggagctcaatgaccgattcgccaactacatcgacaag
gtgcgtttcctggagcagcagaacaagatcctgctagccgagctcgagcagctcaaaggc
cagggtaagtcgcgcctgggagacctgtacgaggaggagatgcgggagctgcgtcggcag
gtggatcagctcaccaacgacaaggcccgcgtggaggtggagcgcgacaacctggccgag
gacatcacgcgtctccgggagaagttgcaggaggagatgctgcagagagaggaagccgag
agcaccctgcaatctttcagacaggatgtcgacaatgcttctttggcgcgtcttgacctt
gaacgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactgcacgatgag
gaaatccaggagctgcaggcccagattcaagaacagcacgtccaaattgatgtggacgtc
tctaagcctgacctcacggccgccctgcgtgacgtgcgtcagcagtatgaaagtgtggct
gccaaaaatcttcaggaggctgaagaatggtacaagtctaagtttgctgatctttctgag
gctgcgaaccggaacaatgatgccctgcgccaggcgaagcaggaggctaacgagtaccgg
agacaggtccagtccctcacctgcgaagtggatgctcttaaaggaactaatgaatctctg
gagcgccagatgcgtgaaatggaggagaactttgctgttgaagctgctaactaccaagac
actattggccgtctgcaggatgagattcagaacatgaaggaagagatggctcgtcacctt
cgtgaatatcaagacctgctgaatgttaagatggcccttgacattgagattgccacctac
aggaagctgctggaaggcgaggagagcaggatttctctgcctcttccaaacttttcttcc
ctgaatctgcgggaaaccaatctggattcactccctctggttgacacccactcaaaaagg
acactcctgattaagacagttgaaactagagatggacaggttatcaacgaaacttctcag
catcatgatgaccttgagtga
DBGET
integrated database retrieval system
