Loxodonta africana (African savanna elephant): 100672071
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Entry
100672071 CDS
T04351
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100672071 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lav04121
]
100672071 (SLX4)
03400 DNA repair and recombination proteins [BR:
lav03400
]
100672071 (SLX4)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
100672071 (SLX4)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100672071 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
100672071
NCBI-ProteinID:
XP_023413189
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MLQWSQPDEGAPSSDTQPSSSGLTVVAPSPSKLRTAELVLQRMQRFKRADPARLKHAPGA
CSLKAMIAENAPKDPQEEPMVGNGCEPGSPATENDGVMALALQQELGQERVPTLEESLEE
EGWFFCQICQKNLSSMNVTRREQHMNRCLDEAEKSLRPSTPQIPECPICGKLFLTSKSRS
SHLKQCAVKMEVCPQLLLQAVRLQTAQLDRRCSPTASGFSPQVGSLKRKGAPNKKEPQKR
RKVNQPKAPSEDILVAMALSRSEVEQSKTVLALGLERAFSEWIKPGAEKKSRKKKLPASL
PPLLVQDSEATWKQTEENVATLFAEAVELSSTPPLPASRILKNKSEKAGWLLQLPEGKQS
FLWEGSALTRTWAPEAFYTAGLVPPIMSRRPAQGLPKLPTWSLRPPDQPKPDVQTHPTPC
GPPPMGHSPREDPAEPDPKKASPFSSQREHQALQDLVDLAREGLSPSQGPSSIGLASWDG
EAAIDLVPSGLPLSGFVLPSEEEHLERGGGASLSLGVLVSDFRAMVNNPHLSDVQFQVDS
GEVLYAHKFVLYARCPLLIQHVNSEGFFAVEDGDLRTQRVLLSDVSTEAARVFLHYLYTA
DTGWPSHLAPSLSSLALRFGMSELVHLCEQAPPTVDVEGGLRKEKEDENCESRAENFQEL
LRLMWVGEEEEAEALSRPEDHGEDREKMDEAEMEEIYEFAATQWKLLQEERAAEREEEAD
QLGEDHTASGCVLASVLVQAQLEDAGQKESPKQGSDKAPTRWKTVEWSAPLASPGQRSRS
EEDAETCELEASRETLHHSSTSSSPGKHRAERKEGASLPSISDYEQLFPSAQGEYAEPSQ
ITSDPEEQKGTVVEKEAEVSCSPRHHQAQAQPARDGGPSWSHLSPHCTDGSSPLKPPLQS
AVSKVISQNSWSPVLPPEQRRDSSIPALLMDPGHHEDRGGSYMSACKSKGGLITTEKSPS
IDLTQSDPGHLCSRLLCSPSNMNRDVGVILLDSDEELELEQTGMKSVSNSPPEERKVLEV
SPMSSELFSVINIDDTDPECSPSPVGGAAELQSGKGEQSGHGVPQGSRGWLRLFCDAESS
PKDSTTDTSWLVPVTPLASRGRPCSSQTPISGLRSRTSVDVETHLRPRAVSENREVNEST
FPVIVPQSPPQYLVPATPGSSESGRRAYTSPSGQRPRYHQHISPVALRPLQRHSSPKPYW
LSRATVGEVVEVEDSDDEQGVASYQANRPLPHGEPSIADDDYCWSVEPHSPIPIDHLNLE
RTGPLSTSSPSSRAREALGSVACGSSSPLGTSPIQGSCTDQGGAHKQSPQASSPGSSRLS
LLNSALWDDWDREEKSLEGPPLAWRLRPDQARKPGGPETPKGAHQKKNLPPKVPITPMPR
YSVMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLESDSEDEIPSSQVPLHVPY
SLAYVTEASKTSGAGGHSPPEATASPIPKRPMGPTEIKTPRCRKKQPGESPPALHIPLAE
EEPLGSDGDAQLPASQEPMATSMDSSDGSFGSQSSSSHEFGAAFESEGDDEGQEEVTASQ
VAVQAADIEEAVWRYIHSQPALYRKVLLYQPLELVELQAELRQNGIRMAAGKLLDFLDAQ
CITFTTAATRKGQLKRKRRRPVGKKKQGQD
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagtggtcacagcccgacgagggtgctcctagcagtgacacccagccctcttct
tccgggctgaccgtggtggctcccagtccctccaagctgcggacagcagagttggtcctc
cagcgaatgcaacggttcaagagagcagaccctgcacgtctgaaacatgctcctggagcg
tgctcactcaaagctatgattgcagaaaacgctccaaaggaccctcaagaggagccgatg
gtggggaacggctgtgagcccgggtcccctgccacagagaacgacggcgtgatggccttg
gccctgcagcaggagctggggcaggaacgagtacccacacttgaggagagcctggaggag
gaggggtggtttttctgccagatctgccagaagaacctttcctccatgaacgtgacgcgg
agggagcagcacatgaacaggtgcttggatgaggctgaaaagtcactaagaccttccacc
cctcagatccctgagtgccccatttgtggcaagttgtttctcacctccaagagcagaagc
agccacttgaaacagtgtgcagtgaagatggaggtttgcccccagctcctgctgcaggct
gtgcggctgcagacggctcagcttgacaggcgctgcagccccacagcatccggcttcagc
cctcaagttggaagtctgaaacggaaaggagcccccaacaagaaggagccccagaaaagg
cggaaagtcaatcagcccaaggcaccttccgaggacatattggtggctatggctctgtct
cgatcggaggtggagcagtccaagactgtgctggcgctcggactggagagggctttttct
gagtggataaagccaggagcagagaagaaaagtcgcaagaagaaactccctgcttccctg
cccccactcttggtccaggactctgaggccacatggaaacagacagaggagaacgtcgcc
acactctttgcagaggccgtggaactgtccagcacgccaccacttcctgcaagcagaatc
ttaaagaacaagtcggaaaaggcaggctggcttctgcagctgcctgaagggaagcagagc
tttctgtgggagggcagtgccctgaccagaacctgggccccagaggccttctacacggca
ggcctggtcccgcccatcatgtcccggcggcctgcccagggtctcccaaaattgccgact
tggtcgctaagaccacctgaccagccaaagccggatgtgcaaacgcaccccaccccctgc
ggcccccctcctatgggccacagccccagggaggacccagcggagcctgaccccaagaag
gcgtcacccttctccagccagagggagcaccaggccctacaggacctcgtggacctggcg
agagaggggctgagccccagccaggggcccagcagcataggcctggccagctgggacgga
gaagcagccatagatttggtgcccagtggcctcccactgtcgggctttgtcctgccctcc
gaagaggagcatctcgagagaggtggtggtgcttcgctctccctcggcgtactggtttct
gacttcagggccatggtcaataacccacacttgagtgatgttcagttccaggtggacagt
ggggaggtgctttatgctcacaagtttgtgctttatgcacgatgtccgctcctcatccag
cacgtaaacagtgaaggcttcttcgctgtagaagatggggacctgaggacccagcgcgtc
ctgctgagtgacgtcagcactgaggcagcccgtgtgttcctgcattacctctacactgcg
gacactggctggccctcccacctggcccccagcctgagctccctggccctcaggtttggc
atgagtgagcttgtccacctatgtgaacaagcacctcctacagtggatgtggagggtggc
ctcaggaaggagaaggaagacgagaactgtgaaagcagagcagagaacttccaagaactc
ttgaggttgatgtgggtaggtgaagaagaggaagcagaggccctgtcgagacctgaggac
catggagaagacagagaaaagatggacgaagcagagatggaagaaatctatgaatttgca
gctactcagtggaagctactccaagaggaaagagcagcagagagagaggaggaagctgac
cagctcggggaagaccatacagcttctggatgtgtcctagcaagcgtcctggtccaagca
cagttggaagatgcaggacaaaaggaatcacccaagcagggaagcgacaaggccccaacc
agatggaaaactgtggagtggtcagctcccctggcctccccaggccagcgttcccgtagc
gaggaggatgcagaaacgtgtgaactggaggcctcaagggaaacgctgcaccactccagc
acctccagctctcctggcaagcaccgggcagaaaggaaagaaggtgcctctttgccctcg
atcagtgactatgaacagcttttcccatcagctcaaggagaatatgctgaaccttcccag
ataacaagtgatccagaggagcaaaaggggaccgttgtggagaaagaggcagaggtgtcc
tgttcccccaggcatcaccaggcgcaggcacagcccgcccgggatgggggtccttcctgg
tcccacctcagtccccactgcacagatggctcatccccattaaagcccccattgcagagt
gcagtttccaaggtgatctcccagaactcatggtccccagttctaccaccagagcagagg
agggacagtagcatccctgcattacttatggatccaggccaccacgaagacagaggaggc
agttacatgtcagcatgcaaaagtaaagggggcctgatcaccacagaaaaatccccgtcc
attgacctcacccagtcagaccctggccacttgtgctccagacttctgtgctctccatcc
aacatgaacagagatgtgggggttattttattggattcggatgaagagttggagctagaa
cagactggaatgaaatccgtttctaatagtcccccagaggaaaggaaagtgctggaagtc
agccccatgtcctcggagctgttttcagtcatcaacattgatgacacagatccggaatgt
tctccaagcccagtaggaggggcagccgagctgcagtcggggaagggtgagcagtcaggg
cacggggtccctcagggcagcagagggtggctcaggctcttctgtgacgcagaaagcagc
cccaaagacagcaccacggacacatcgtggctggtgcccgtcaccccactggccagcagg
ggccgcccctgctcctcccagaccccaatctcaggcctgcggtctaggacttcagtggat
gtagagactcacctcaggcccagggctgtgtccgagaacagggaagtaaacgaaagcacg
tttccagtcatcgtgcctcaatcaccgccacaatatctggttcctgccaccccaggaagc
tctgagagtggcaggcgagcctacacaagcccttctggtcagcggcccaggtaccaccag
cacatctctcctgtggctcttcgtccactgcagagacactcgtcgcccaagccatactgg
ctgagtcgggccactgtaggtgaagtggtggaagtcgaggacagtgacgacgaacaggga
gtagcttcctaccaggcaaacagacccctgcctcatggggagccctccatcgcagatgac
gactactgttggagtgttgagccccactcaccaattcccatcgaccacttgaacctcgag
cggactggccccctgagcaccagcagccccagcagtagggccagggaggccctgggcagc
gtggcctgtggctcctccagccccctgggcacaagccccatccaagggagctgcactgac
cagggtggagctcacaagcagtcccctcaggccagctccccagggagcagcaggctgagc
ttgctgaattcagctctgtgggatgactgggacagagaagagaagtcactggagggtcct
cctctggcctggagactacgccctgaccaagctaggaagccaggagggccagagacaccc
aaaggtgctcatcagaagaagaacctgcccccaaaagtacccataaccccaatgccaagg
tactccgttatggagacaccggtactgaagaaagagctggataggtttggagtccgccct
ctgcccaaacgccagatggttctgaagctgaaagagatattccagtacactcaccagacc
ctggaatctgactctgaggacgagatcccatcctcgcaggtgcccctgcatgtgccttac
agcctggcctatgtcactgaggcctctaagacttcaggggcaggaggccattccccaccg
gaggctaccgccagccccattccgaaaaggcccatgggacctactgagatcaagaccccc
cgatgtagaaaaaagcagcctggggaaagccccccagccctgcacataccactagctgag
gaggagcccctaggttctgatggtgacgcccaactgccagcttcccaggagcccatggcc
acctctatggatagcagtgatgggtcctttggctcacagagctcttcctcccatgagttt
ggagcagcctttgagtctgaaggtgacgatgagggccaggaggaggtcaccgcctcgcag
gtggccgtccaggcagcagacatagaggaggccgtgtggcgctatatccactcccagcct
gccctgtaccggaaggtcctgctgtaccagcccttggagctggtggaactgcaggcagaa
ctgaggcagaatggcatccgcatggccgcagggaagctgctggacttcctggatgcccag
tgcatcaccttcaccaccgctgccaccaggaaggggcaactcaaaaggaagagacggcgg
cctgtgggcaagaagaagcaggggcaggattga
DBGET
integrated database retrieval system
