Loxodonta africana (African savanna elephant): 100672166
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Entry
100672166 CDS
T04351
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03020
RNA polymerase
lav03420
Nucleotide excision repair
lav05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100672166 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
100672166 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100672166 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100672166 (POLR2B)
03400 DNA repair and recombination proteins [BR:
lav03400
]
100672166 (POLR2B)
Enzymes [BR:
lav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100672166 (POLR2B)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100672166 (POLR2B)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100672166 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
RNA_pol_Rpb2_1
DUF5817
Motif
Other DBs
NCBI-GeneID:
100672166
NCBI-ProteinID:
XP_023410792
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPVRYRKGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFV
SDRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYA
KEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPL
LAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKA
HQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHA
VGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKD
PEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRH
IDQLKEREYNNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIH
PSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLV
TTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQES
KKGFDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDE
LESTNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRH
GQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDA
TPFNDAVNVQKISNLLSEYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKI
HSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVC
NLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggacgaggatatgcaatatgatgaggatgatgatgaaatcaccccggat
ttgtggcaagaagcatgctggattgtaatcagttcctattttgatgagaaaggcttggtc
agacaacagctggattcttttgatgagtttattcagatgtccgttcaaagaattgtggaa
gatgctccaccgatagacctacaggctgaagctcagcatgcgagtggagaagttgaagaa
ccggtaagatacagaaagggtgcaaaaaagagtgcaattggtcaacgcattgtggcaact
ctaccgtatatcaaacaagaagttcccatcattattgtattcagagcattaggttttgtg
tctgacagagatattttagagcatattatttatgattttgaagatccagagatgatggaa
atggttaaaccttctcttgacgaagcttttgtcatccaagaacagaatgttgccctaaat
ttcattggctcaagaggggcaaagccaggtgttactaaagagaaaagaattaaatatgca
aaagaggtcttacaaaaggaaatgctcccccacgttggcgtcagtgacttttgtgagacc
aaaaaagcctatttcttggggtatatggttcataggttacttctggcagccttgggtaga
agagaactggatgacagagatcactatggaaacaaaagattggatcttgctgggccacta
cttgctttcttatttagaggtatgtttaagaatttgcttaaagaagtgcggatctatgca
cagaagtttattgaccgagggaaggattttaacttggaattggcaattaaaacaaggatt
atatctgatggcctaaaatactctttagctactggaaactggggtgatcaaaagaaagct
caccaagccagagctggagtatctcaggtattgaaccgcctgacttttgcatctactctt
tctcacctgcgtcgtttaaattctcctattggtagagacggcaagctagcaaaaccaaga
cagttgcataatactttgtggggaatggtgtgtcctgctgagaccccagagggccatgct
gtaggacttgtgaaaaatttagctctgatggcttatatttcagttggatctcaaccatct
ccaattctggaatttttagaagaatggagtatggaaaatttagaagaaatttctcctgca
gctattgctgatgcaaccaagattttcgttaatggctgctgggttggaatacataaagat
cctgaacagcttatgaacaccctaaggaaattgcggcgtcagatggacattattgtctct
gaagtttctatgatcagagatattcgagagagggagattcgtatctatacagatgcaggc
cgtatttgtagaccacttctgatagtggaaaaacaaaagctccttttgaagaagagacat
attgaccagttgaaagagagagaatataacaactacagctggcaggatcttgtggccagt
ggggtagtagaatatatcgataccctcgaagaagaaacagtgatgctcgcaatgactcca
gatgatttacaggagaaggaagtagcttattgttccacatacacacattgtgagattcat
ccttcaatgatccttggtgtctgtgcatctattattccctttcctgatcataaccagtcc
cctagaaacacataccagtctgctatgggtaagcaggctatgggagtttatattaccaat
tttcatgttcgtatggacacattggcccacgttctctattatcctcaaaaaccacttgtg
accaccaggtctatggaatatctgcgattcagagagctcccggcaggtatcaactcaatt
gtggccattgcatcatacactggttataatcaagaagactctgttatcatgaaccgttca
gctgtagaccgaggctttttcaggtctgttttctaccggtcttacaaagaacaggagtct
aaaaaaggatttgatcaagaagaagtttttgagaagcctacacgtgaaacgtgccagggc
atgaggcacgccatttatgacaagctcgatgatgatggtctgatagctcctggggttcgt
gtatcaggagatgatgttatcataggcaaaacagtcaccttgccagaaaacgaagatgaa
ttggagagcactaatagacgctataccaagagagactgtagcactttcctcagaactagt
gagacgggtattgtggatcaggtgatggtaactctcaaccaggaaggatataaattttgt
aaaataagggtgcgctctgttagaattccacaaattggagacaaatttgctagtcgacat
ggtcagaagggtacttgtggtattcagtataggcaagaggacatgcccttcacctgtgaa
ggtatcacccctgatatcatcataaatccccatgccatcccctctcgtatgactatcggt
cacttgattgaatgtcttcaagggaaggtatcagccaacaagggtgaaattggtgatgcc
actccctttaatgatgctgtcaacgtgcagaagatttctaaccttttatctgaatatggc
taccatctcaggggaaatgaggtcctgtacaatgggtttactggtcgaaaaatcacatcg
caaatttttattggccccacttattaccagcgtttgaagcatatggtggatgataagatt
cactctcgtgctagaggacctattcagatccttaatagacagcccatggaaggtagatct
cgtgacggtggcctgcgttttggagaaatggaacgagattgtcagattgcccatggagca
gcccagtttttaagagaacggttgtttgaggcatcagatccatatcaagttcacgtttgc
aatctctgtggaataatggccattgctaacaccaggacccatacgtatgagtgcaggggc
tgccgcaataaaacccagatttctttggtgcgaatgccttacgcgtgcaaactgttgttt
caggaacttatgtctatgagtattgcacctcgaatgatgagtgtttag
DBGET
integrated database retrieval system
