Loxodonta africana (African savanna elephant): 100672268
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Entry
100672268 CDS
T04351
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100672268 (TAF1C)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100672268 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
100672268
NCBI-ProteinID:
XP_023413887
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MMDFPSSLRPTLFMSGPLGLSSVPNLSFMCSWRDALTLPESQPQSAENVAPHLARDLRWE
PETPGPFPLLPPSPDPWDPGPTAHDLLFRGGHQSCRRPRATLDVTEQLSRFLWDHGDIAF
GPLGNLMQENFKLEGARSRSKTKTVVSVKRLLQDLGGHQPWGCPWAYLSHRQRRFSILGG
PVLGGPVASLLGELLKEELAGRWGQLLLDDAFTGGALAWVPGKMPLVGQLVYPNGGALDR
LCFQEVSVTPGSDPQVLGDPGHIQLRGPVRQVVTRTVQGEALLAVRSDYHCAVWKVSKQG
RPAPLQVLQVEKGATGINLSPHLPGELAVCSRSGAVCLWTPQDGLQQVYKDPETLVFRDP
SPWRWADFTAHPRVLTVGDRTGVKMIDTQGPPGCGLLLFRGGAEASCQKGERVLLAQYLG
ESSPASLSPTLHLICTQLFPGLQFSLYLVDERLPLVPMLKWAHGLPSAPLMAQLLPAPCP
GAPRPLLLGGQGGQLQLLHLSGEEVSVPRLAGPPQSLPARTDALSGFPLLEPASQRRLQE
RLDAPTIGLAAAVPPSASTSGLALFHLSKAGDVFYQHLRLQEGSSFCRDAGLPSDPSPEP
HTPTAAAPTPSRTPTPTTASWTPQATAYCSRWLKALLKVPLPPPVWTAPTFSHRHLLGYK
EQLQDGGKVLAGLRAAMTQGRLLRQRDVGSFPTAEPPPAPESGPEDELSERLDEAWEGRG
ADWWRRRQGRSLGLGHQPRRHKRRTQLSSTFSSLSGRWDLSDGPSPPPSPHRTSPVPRPL
PPATPHSQGLTQELWTRGVPVERQQTLQDYMARLPSSGLGATSAPPSQASSIRSTPSRQQ
APRKKSRMGF
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgatggacttccccagctctctccgccccacgctgtttatgagcggcccccttggtctg
agcagtgtccccaatctgtcctttatgtgcagctggagagatgcactgaccctgccagag
tcccagccccagagtgctgagaatgtggcaccacacttggccagggacctgcgatgggag
ccggagacccctgggccctttcccctgctgcctcctagtcctgatccctgggaccctggg
ccgactgcccacgacctgcttttccgtggtggtcaccagtcctgcagacggccccgagcc
acactggatgttactgagcagctcagccgcttcctgtgggatcatggagacattgccttt
gggcccctggggaacctgatgcaggagaatttcaaacttgagggcgcacggagccgctct
aagacgaagacggtggtcagtgtgaagaggctgcttcaggaccttggtggacaccagccc
tgggggtgcccctgggcatacctcagccaccggcagcgccgattctctatcctcgggggc
ccggtcctgggtgggcccgtggccagcctcctgggggagctgctgaaggaagaactggca
ggacgctgggggcagctactcttggatgatgccttcactgggggtgccctggcgtgggtg
cccgggaagatgcccctggttgggcagctggtctaccccaatggaggtgccctggacagg
ctgtgcttccaagaggtcagtgtgaccccaggcagtgacccccaggtccttggggaccct
ggccatatccagctccgaggacctgtccggcaggtggtgacgcgcactgtccaaggagaa
gctctgctggcagtccgctccgactaccactgtgctgtgtggaaggtcagtaaacagggg
cggccggccccactccaggtgctgcaggtggagaagggagccacagggatcaatctcagc
cctcacctgcctggggagctagccgtctgcagccgttccggagccgtctgtctgtggacc
ccgcaggatgggctgcagcaagtctacaaggaccctgagaccctagtgttccgggacccc
tctccctggcgctgggcagacttcactgcccaccctcgggtgctgactgttggtgatcgc
actggagtgaaaatgatagacacgcagggcccaccaggctgtggtctgctgctttttcgt
gggggagcagaggcctcttgccagaaaggggaacgcgttctgctcgcccagtacctgggg
gagtccagtccggcatctctgagtcccaccctccatctcatctgcactcagcttttccct
ggcctgcagttctcgctctacctggtggatgagcgcctccccttggtgcccatgctgaag
tgggcccacggcctgccctctgcacccctgatggcccagttgctgcccgcaccctgcccc
ggtgcccctcggcccctgcttctggggggccagggtggccagctgcaactgctgcacctc
tcaggagaggaggtttctgtaccccggctggcagggccccctcagtcccttccagcgagg
accgacgccctctctgggttccctctgctggaacctgcaagtcagcggcggctgcaggag
cggctggatgctccaaccataggtctggcagctgccgtcccgccctctgcctccacatca
ggcctggcactcttccacctctccaaggcaggagatgtattctaccagcacctgcgcctc
caggagggatccagcttctgcagggatgctgggcttcccagcgaccccagccccgagccc
cacacacccacagcagcagctcccaccccaagcaggacacccacacccaccacagcttcc
tggacgccccaggccactgcctattgcagccggtggctgaaggccctgctcaaggtgccg
ctgcccccacctgtgtggacagcacctaccttttcccaccgccaccttctgggctacaag
gagcagctgcaggatgggggtaaagtgctggcaggtctgcgagcagccatgacccagggg
cggctcctgcggcagagggacgtgggctcattccccacagctgagccgcccccagcccct
gagtctggcccagaggatgagctcagtgaacgtctggacgaagcctgggagggccgggga
gcagactggtggaggagacgacagggcaggagcttggggctggggcaccagccaaggcgg
cacaagcgccgcactcagctttccagcaccttctcctcactcagtggccgctgggacctc
tctgacggccccagcccccctcccagcccacatcgcacgtcgcctgtgccccggcctctg
cccccagccaccccccactcccaggggctgacccaggagctgtggacccggggtgtccct
gtggagcggcagcagacactccaggattacatggcaagactgccttcttctggccttggg
gccacctctgcacccccgtcccaggcctccagcatccggagcaccccgtccagacagcag
gccccccgaaagaagtcccgcatgggcttctga
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