Loxodonta africana (African savanna elephant): 100672680
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Entry
100672680 CDS
T04351
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100672680 (COL10A1)
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Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
100672680
NCBI-ProteinID:
XP_003404324
UniProt:
G3TMQ3
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Position
Unknown
AA seq
680 aa
AA seq
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MLPQIAFLLLMSLNLVHGVFYAERYQTPTGIKGPLPNTKTQFFIPYAIKSKGISVRPQQG
IPGPAGPAGPRGYPGPSGPPGKPGYGSPGPKGEPGLPGPPGPSVTGKPGVPGLPGKPGER
GPYGPKGDIGPAGLPGPRGLPGPPGIPGPAGISVSGKPGQQGPTGAPGPRGFPGEKGTPG
VPGVSGQKGETGYGAPGRPGERGLPGAQGPMGPPGPPGVGKRGENGFPGQPGIKGDRGFP
GERGPTGPPGPQGPPGEQGLEGIGKPGPTGAPGQPGIPGAKGHPGAPGIAGAPGAPGFGK
PGLPGLKGQRGPVGLPGSPGAKGEQGPAGLPGEPGLTGPPGNMGPQGPKGIPGNHGIPGA
KGETGPAGPAGYPGAKGERGPPGLDGKPGYAGEPGLNGPKGDPGLPGPKGDSGVRGSPGL
LGPMGPAGAKGVPGLNGEPGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGNPGPPGPAGV
ATKGLSGPIGPAGPPGPRGHAGEPGLPGPPGPPGPPGQAVMPEGFTKAGQRPSLSGTPLV
SANQGVTGMPVSAFTVILSKAYPAIGSPIPFDKILYNKQQHYDPRTGIFTCVIPGIYYFS
YHVHVKGTHVWVGLYKNGTPIMYTYDEYTKGYLDQASGSAIIDLTENDQVWLQLPNAESN
GLYSSEYVYSSFSGFLVAPM
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgctgccacaaatagcctttttgctgctaatgtccttgaacttggttcatggagtgttt
tatgctgagcgataccaaacacctacaggcataaaaggcccacttcccaacaccaagaca
cagttcttcattccctatgccataaagagtaaaggcatatcagtaagaccacagcaaggt
attcctggaccagcaggccctgctggacctcgggggtacccaggtccttctggaccacca
ggaaaaccaggctacggaagtcctggacccaaaggagagccagggttgccaggaccacca
ggaccatcagtcactggaaagccaggtgtgccaggactcccaggaaaaccaggagaaaga
ggaccatatggaccaaaaggagatattggaccagctggtttaccaggaccccggggtctg
ccagggccacctggaatacctggcccagctggaatttctgtgtcaggaaaacctggacaa
cagggacctacaggagcccccggacccagaggctttcctggggaaaagggtacaccggga
gtccctggtgtgagtggacagaagggggaaacaggatatggtgctcctggccgcccaggt
gaaaggggccttccaggtgctcagggacccatgggaccacctggtcctcctggagtaggg
aaaagaggtgaaaatgggtttccaggacaaccaggcatcaaaggtgatcggggctttcca
ggggaaaggggacccactggcccaccgggtccacaaggccctcctggggaacaaggacta
gaaggcattggaaagccaggacccactggagccccaggccagccaggaattccgggagca
aaaggtcaccccggggctccaggaatagctggggccccaggggctccaggctttgggaaa
ccaggcttgccaggcctgaaagggcaaagaggacccgtcggccttccggggagtccaggt
gccaaaggggaacagggcccagcaggtcttcctggggaaccaggtctgactggaccccct
ggaaatatgggaccccaaggaccaaaaggcatcccaggcaaccacggtattccaggtgct
aaaggtgagacagggccagcagggcctgctggataccctggggctaaaggagaaagaggc
ccccctggtttagatggaaaaccagggtatgcaggagaaccaggtctcaatggtcctaaa
ggtgacccaggtttaccaggcccaaaaggtgattctggagttagagggtctcctggtctt
ctaggtcctatgggcccagcaggagctaaaggagttcctggacttaatggcgagcctggt
ccaagaggtgcccctggaataccaggtactagaggccccattgggccaccaggcattcca
ggattccctggatctaaaggggatccaggaaatccaggtcctcctggcccagctggtgta
gcaactaagggcctcagtggaccaattgggccagctggacctccaggcccaagaggtcat
gctggagagcctggcctcccagggcctccagggcctccaggccccccaggacaagcagtc
atgccggaaggcttcacaaaggcaggccaaaggcccagtctttctggaacgcctcttgtt
agtgccaatcagggtgttacaggaatgcctgtgtctgcttttactgtcattctctccaaa
gcttacccagcaataggctcccccatcccatttgataagattttgtataacaagcaacag
cattatgacccaagaactggaatctttacttgtgtgataccaggaatatactatttctcc
taccacgtgcatgtgaaagggacccatgtttgggttggcctgtataagaatggcaccccc
ataatgtacacctatgatgaatacaccaaaggctacctggatcaggcttcagggagtgca
ataatcgatctcacagaaaatgaccaggtgtggctccagctgcccaatgctgagtcgaat
ggtctgtattcctccgagtatgtctactcctctttctcaggattcctagtggctccaatg
tga
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