Loxodonta africana (African savanna elephant): 100672683
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Entry
100672683 CDS
T04351
Symbol
SYNPO
Name
(RefSeq) LOW QUALITY PROTEIN: synaptopodin
KO
K21112
synaptopodin
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100672683 (SYNPO)
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Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
100672683
NCBI-ProteinID:
XP_010590213
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All DBs
Position
Unknown
AA seq
907 aa
AA seq
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MEGYSDEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQAPPTPPPA
EVHSSTAGVNQNLSSPSTTLTTPASNSNHNLPDTDVNQNPPATVIPQSLALSSTQQDSSE
EELPPNGTVPDSKPSTLCVGGQPQAPAAEVKSSTLLIDKISTPASVTNTFSKEATPIPSS
EASTPEFMSSSLLIDIQPIGLGMSAEQEMPGRAATTTPAKLYSEVHLTLAKPQSVVNRTA
RPFGIQGSGGTSHMERSPMVERRNLGEKALAPHTPSLADRSPQPQRHTMSYSPMVERQPL
MQRSPALERRPLGNFTPPPTYAETLSTAPLASRVRSPPSYSALYPSSDPKPSHWKGPAVP
TSKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEP
FALGAEASNFQQEPVPRDRASHAATEEALPEWASCLKSPRIKAKPKPKPNQNLSEASGKG
AELYARRQSRMEKYVIESSGHTELARCPSPTMSLPSSWKYSTNVPGSLRVASRSPARTPP
ASLYHGYLPENGVLRPEPTKQPPYQMRSSLFVLSPIKEPAMVSPRAASPRGASPRAASPA
KPSSLDLAPSLPKAALPPSPALPRPSRSSPGLYTSPGQDGLQPTAVSPTYSSDISPVSPS
RAWSPRAKQAPRPSFSTRNAGIEAQDRRENLPTSPPWTPGASRPPSSLDGWVSPGPWEPG
CGSSMSSPPPLPPPPPMSPSWSERSISPLRTEPEARPPSRQLQALLARNIINAARRKSAS
PRPPGAESLRPFSPPQAPAPPPPPRMRSPQPARPGLVAAIGTTFAPIPRSQLPAGPSPCA
SPRSPLPAAPKPFPYRRSPTDSDVSLDSEDSGAKSPGILGYNICPRGWNGSLRLKRGSLP
AEASCTT
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtactcagacgaggccagcttgctgcggcacctggagaaggtggccagtgag
gaagaagaggtgccgctggtggtttatttaaaggagaacgcagccctgctgacggccaat
gggctccacctgtcccagaaccgcgaggcccagcaggccccaccgaccccgcctccggct
gaagtccatagctcaactgcaggtgtcaaccaaaatctttcctcacccagcaccacactc
actacaccagcttctaacagcaaccacaacctgccagacactgatgtcaaccagaaccca
ccggcaactgtcattccacagagcctggcactttctagcacccaacaggattcttctgag
gaagagctcccgccaaatggcacagtgccagattccaaacccagcaccctgtgtgttggc
gggcagccccaggcgccagctgcagaagtgaaatccagcacactcctaattgataagata
tcaactccagcttccgtcaccaacaccttctccaaggaagccactcccatccccagctcg
gaggcctcaacaccagagttcatgtccagctctctgctcatcgacatccagcccattggc
ctagggatgtcagcagaacaagagatgcctgggcgggcagccaccaccacacctgccaag
ctgtatagtgaggtccacctcacactggccaaacctcagtcagtggttaacaggacggcc
aggccctttgggatccaaggatcagggggtaccagccatatggaacgaagcccgatggta
gagagacgaaatctcggggagaaggccctggccccccatacccccagcctggcagataga
agcccccagccacagagacacacaatgtcctacagccccatggtggagagacagccctta
atgcaacgaagtccagctttggagagacggcccttggggaacttcaccccaccccccacc
tatgccgagaccttgtctacggcccccctggcttcccgggttaggtctccaccctcttat
tctgccctgtaccccagctctgaccctaagccttcccattggaagggcccggcagttccc
accagcaagacaggcattttggaggagtcaatggcccgccggggcagccggaaatccatg
ttcacctttgtggagaagcccaaggtgactccgaatccagacctgctggatctggtgcag
acggctgatgagaagcggaggcagagggaccagggggaggtgggcgtggaggaggagccc
ttcgcactgggggccgaggcctccaacttccagcaggagccagtgccccgggatagggcc
agccatgcagcaaccgaggaggcccttccggagtgggcctcgtgcctcaagtcgccccgc
atcaaggccaagccaaagcccaaacccaaccagaacctctctgaggcctctgggaagggg
gctgagctctatgctcgccggcagtctcggatggagaagtatgtcattgagtcttcaggt
cacaccgagctggcccgctgcccttcacccactatgtccctgccttcatcctggaaatac
tctactaatgtccctgggagcctccgagtagcctctcgcagcccggcccgaaccccacct
gcctccctctaccatggctacctgcctgagaatggagtcctgcgcccagagcccaccaaa
cagccgccataccagatgcggtcctcactctttgtcctctcacccatcaaggaacctgcc
atggtctcgccaagagctgcctcaccaagaggtgcatcaccaagagctgcctcacctgcc
aaaccaagctccctggacctggcgcccagcctgcccaaggcggctctgccaccatctcct
gccctgcctcggccctcgcgttcctcaccgggcctctacacctcgcctggccaagatggt
ctccagcccactgctgtgagccctacctacagcagcgatatctcccccgtgtctccctcc
agggcatggtctcctcgagctaagcaggccccacggccctctttctccacccgcaacgcc
gggatcgaggctcaggaccgccgggagaacctgccaacctccccgccctggacgcccggc
gcgtcccggccccccagcagcctggacggctgggtgagcccgggcccttgggagccaggc
tgcgggagcagcatgagcagccctccgccgctgccgccgccgccgcccatgtccccctcg
tggagcgaacgctccatatccccgctgcgtaccgagcccgaggcgcggccacccagtcgc
cagctgcaggcgctactggcgcgaaacatcatcaacgcggcccggcgcaagagcgcctcc
ccgcggccacccggcgccgagagcctgcggcccttctctccgccccaggcgccggcgccg
ccgccgccgccgcgcatgcgctcgccacagccagcccgcccgggcttagtagccgcgatc
gggacaacgttcgccccgattccgcggagccagctgccagccgggccctcgccttgcgcc
agcccccggagcccgctaccagcggcacccaagcctttcccctaccgccgctcgcccacg
gactccgacgtgtccctcgactccgaggactccggagccaagtctccaggcatcctcggc
tataacatctgcccccgcgggtggaacggcagcctgaggctcaagcgtggcagcctgcca
gccgaggcctcctgcaccacataa
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