Loxodonta africana (African savanna elephant): 100673117
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Entry
100673117 CDS
T04351
Symbol
EXOSC6
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100673117 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100673117 (EXOSC6)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100673117 (EXOSC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100673117
NCBI-ProteinID:
XP_010595164
LinkDB
All DBs
Position
Unknown
AA seq
179 aa
AA seq
DB search
IRLLCGFRRATFXVLRRRAPPGGGEERELALALQEALEPAVRLGRYPRAQLEVSALLLED
GGSALAAALTAAALALADAGVEMYDLVVGCALSRAPGPAPAWLLDPTRLEEERAAAGLTV
ALMPVLNQVAGLLGSGEGCPTESWAEAVRLGLEGCQRLYPVLQQCLVRAARRRDAATLS
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atccgcctgctttgtggcttccgccgcgcgaccttttaggtcctccggcgccgcgcacct
cccgggggcggcgaggagcgcgaactggcgctggcgctgcaagaggcgcttgagccagcc
gtgcgcctgggccgctacccgcgcgcgcagctcgaggtgtcggcgctgctgctcgaggac
ggtggctcggcgctggctgccgcactcacggccgccgcgctcgcgctggccgacgccggc
gtcgagatgtacgacctggtggtgggttgtgccctgagccgcgctccgggccccgcgccc
gcctggctcctggaccccacgcggctcgaggaggagcgtgccgccgccggcctcactgtg
gctctcatgccggtgctcaaccaggtggccgggctgctgggcagcggggagggctgtcca
actgagagctgggccgaggctgtgcgcctgggcctcgagggctgccagcgcctctacccc
gtgctgcagcagtgcctggtgcgggccgcccgccggagggacgcagccaccttgtcctga
DBGET
integrated database retrieval system
