Loxodonta africana (African savanna elephant): 100673251
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Entry
100673251 CDS
T04351
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-6-like
KO
K16493
protocadherin alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lav03036
]
100673251
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100673251
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
100673251
Cell adhesion molecules [BR:
lav04515
]
Cadherins
Protocadherins
100673251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
100673251
NCBI-ProteinID:
XP_003404851
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MRFSWGGGLGTRRLLLPLLLLAAWEAGSGQVHYSVPEEAKHGTFVGRIAQDLGLELAELV
PRLFRVASKGRADLLEVNLQNGILFVNSRIDREELCGRSAVCSIHLEVIVDKPLQVFHVE
VEVKDINDNPPVFPVKEQRVRIYESRLPDSLFPLEGASDADVGSNSILTYKLSSGEYFAL
DVKRNSDDIKQIGLVLRKSLDREEIPEHNLLLTATDGGKPELTGTVQLLVTVLDVNDNAP
CFEQSEYEVRIFENSDNGTVVIRLNASDRDEGVNKEISYSFNSLVSSMVFAQFSIDSNTG
VIVIQGNLDFEQRNLYEIRIDATDKGHPPMAGHCTVLVKVLDKNDNAPQIALTSVSLPVP
EDAELGTVIALIRVSDLDSGDNGQVTCSLAPHVPFKLLSTFKNYYTLVLKTALDRENVST
YDLVVTARDGGLPSLSATTSVSVEVADVNDNAPAFAQPEYTVFVKENNPPGYHIFTVSAR
DADSQENALVSYSLVERRVGERTLSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDS
GFPPLGSNVTLQVFVLDENDNTPKLLPSGSGGVGGAVSELVSRSLGAGQVVAKVRAVDAD
SGYNAWLSYELQPASGGERSPFRVGLYTGEVSTTRALDEVDAPRQRLLVLVRDHGEPPLV
ATATVLVSLVDSGQALKTSSRESSGFAGPEVALVDINVYLIIAICAVSSLLVLTLLLYTV
LRCSVPPTEGACGPEKPTLVCSSAVGTWSYSQQRRQRCALGRGRPRLTSWPSAPAFRHVL
LQQIWASIKT
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttcctggggaggcggcctcggaacccggcgcctgctgcttccgcttctgctc
ctcgcagcctgggaggccgggagcggccaggtccactactccgtccccgaggaggccaaa
cacggcaccttcgtgggccgcatcgcgcaggacctggggctggagctggccgagctggtg
ccgcgcctgttccgggtggcgtccaaaggccgcgcggaccttctggaggtgaatctgcag
aacggcattttgttcgtgaattctcggatcgaccgcgaggagctgtgcgggcggagcgcg
gtgtgcagcatccacctggaggtgatcgtggacaagccgctgcaggttttccacgtggag
gtggaggtgaaggacattaacgacaacccgccggtgttcccggtaaaggaacaaagagtg
cggatttacgaatctaggttgccagattctctgtttccactggagggcgcgtctgatgcc
gatgttggctcaaattccatcttaacttataaactcagttccggcgaatacttcgcgcta
gacgtgaaaagaaacagcgatgatattaaacagattgggcttgtgttaaggaagtctttg
gacagagaggaaatacccgaacataacttactcctgacggccaccgacggaggcaaacct
gagctcaccggcactgttcagctgctcgtcaccgtgctggatgtgaacgataatgctccc
tgtttcgaacaatctgaatatgaagtgagaatattcgaaaactctgacaatggaacagta
gttatcagacttaatgcttctgatcgggatgaaggagtgaataaggaaatttcgtactca
tttaatagccttgtttcatccatggtttttgcccagtttagcatagattcaaatactgga
gtaatagtaattcaagggaatttggattttgaacaaagaaatttgtatgaaatccgcatt
gacgctacggacaaaggtcacccaccgatggcaggtcattgcaccgttttggtgaaagtt
ttggataaaaatgataatgcccctcagattgcattaacttcggtatccttgcctgtccca
gaggacgctgagctgggtactgtcattgccctgatcagagtgtctgatctggactctggt
gataatgggcaggtgacctgctctctggcgccccatgtcccattcaaacttttgtccaca
ttcaagaattactacactctggtgttaaagactgccctggaccgtgaaaatgtgtcaacc
tatgatttggtggtgacagcacgggatgggggtttaccgtccctgtcggccacaaccagc
gtgtccgtggaggtggctgacgtgaatgacaacgcgcctgcgtttgcacagccagagtac
acggtgttcgtgaaggagaacaacccaccgggctaccacatattcacggtgtcagcgcgc
gacgcggactcgcaggagaacgcactggtgtcctactcactggtggagcggcgggtgggc
gagcgcacgctatcgagctacgtgtcggtgcatgccgagagcggcaaggtgtacgcgctg
cagccgctggaccacgaggagctggagctgctgcagttccaggtgagcgcgcgcgactcg
ggcttcccgcctctgggcagcaacgtgactctgcaggtgttcgtgctggacgagaacgac
aacacgccgaagctgctgccgtctgggtcgggtggcgtgggcggcgcagtgagcgagctg
gtgtcaaggtcgttgggtgcaggccaggtggtggcgaaggtgcgcgcagtggacgccgac
tcgggctacaacgcatggctgtcgtatgagctgcagccggcatcaggcggtgagcgcagc
ccgttccgcgtgggtctgtacacgggcgaggtgagcacaacgcgcgcactggatgaggtg
gacgcgccacgacagcgcctgctggtgctggtgagggaccacggggagccgcctctggta
gccacggccaccgtgctggtgtcgctggtagatagtggccaggcactgaagacgtcgtca
cgggagtcgtcgggtttcgccggcccggaggtggcgctggtggatatcaatgtgtacctg
atcattgccatctgtgcagtgtccagcctgttagtgctcactctgctgctgtacaccgtg
ctgcggtgctcggtgccgcccacagagggagcgtgcgggccggagaagcccacgctggtg
tgctccagcgcggtggggacctggtcgtactcgcagcagaggcggcagaggtgtgctctg
gggaggggccgcccaagactgacctcatggccttcagccccagccttccgccatgtcctg
ttgcagcagatatgggcgagcatcaagacttaa
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