Loxodonta africana (African savanna elephant): 100673297
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Entry
100673297 CDS
T04351
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03410
Base excision repair
lav04140
Autophagy - animal
lav04217
Necroptosis
lav04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100673297 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100673297 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
100673297 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100673297 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lav03036
]
100673297 (HMGB1)
03400 DNA repair and recombination proteins [BR:
lav03400
]
100673297 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lav04147
]
100673297 (HMGB1)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
100673297 (HMGB1)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100673297 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
100673297 (HMGB1)
Exosome [BR:
lav04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100673297 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
100673297
NCBI-ProteinID:
XP_003414007
UniProt:
G3SLE0
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcgtatgcattttttgtg
caaacttgccgggaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttccaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaagggaaattt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaacgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgcccaaaaatcaaaggcgaacatcctggccta
tccattggtgatgttgcgaagaagcttggagagatgtggaataacactgctgccgatgac
aagcagccttatgagaagaaggccgccaagctgaaggagaaatacgaaaaggatattgct
gcataccgggctaaaggaaagcctgacgcagccaaaaagggagttgtgaaggctgagaaa
agcaagaaaaagaaggaagaggaggaggatgaagaagatgaggaagatgaagaggaggag
gaggatgaagaagatgaagacgaagaagaagatgatgatgatgaataa
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integrated database retrieval system