Loxodonta africana (African savanna elephant): 100673527
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Entry
100673527 CDS
T04351
Symbol
ACIN1
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03013
Nucleocytoplasmic transport
lav03015
mRNA surveillance pathway
lav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100673527 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
100673527 (ACIN1)
03015 mRNA surveillance pathway
100673527 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100673527 (ACIN1)
03041 Spliceosome [BR:
lav03041
]
100673527 (ACIN1)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100673527 (ACIN1)
Spliceosome [BR:
lav03041
]
Complex C
Other components
EJC/TREX
100673527 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
100673527
NCBI-ProteinID:
XP_003420992
UniProt:
G3SSV6
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
MWRRKYPSSSGGTRGVLSGNRGVDYGSGRGQLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSSMSEEKGESDDERPRKGERRSPRVRQARAAKLS
ECSQVAEEEEDQEAPSRNLRVRADQNLRTEEEEEEEEEEEEEEEEEEENEGQKSREAPLL
KQFEEEEEEEEVSRAKPEGVMDERPKTIRSQEQEGFEKGGRVTRSQEETRRSHLARHQQE
KGMKTPSPLEEEEGETRSFKGLEGKSKSPSPPQLTEDLEKVPLALQPEQTASEEETLPPL
LTKEASSPSPNAQLRSEEEVEPMEGPAPPVLVQLAPPNTDAEARELLIAQHPVQLMGGLS
PLSSPTDTKVESPAEKVPEESVLPLVQKSTLAESSIQKCLETEPEKSAEPVPLKIEELAP
AKGIIEESLKQPSLEQKEGKRASHTLLPSHSSKRSADSSSSSRSSSSSSSSSRSRSRSPD
SSGSRSHSPPRSKQRDGSQARSYPNPRSRPKMDSRSTSESRSRSRSRSRSRSASSNSRKS
LSPGISRDSSTSYTETKDPSSGQEVATPPVLKKQVLEPKERTTTSSSSIRVRRMSQPEPS
EKRMTQRLQPEQGSPKKCEAEEAEPPAATQPQTSETQTSQQPESERIQHTVEEKEEVNMD
TTENRPENEIPEPPMPIADQVSNDDRPEGSAEDEEKKESSLPKSFKRKISVVSATKGVPA
GNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDS
RISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPVAPQVS
VEVALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVH
ISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWP
QSNPKFLCADYAEQDELDYHRGLLVDRPSETKAEEQGVPRPLHPPPPPPAQPPQHPRAEQ
REQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKK
SEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIIQKEAERAERAKEREKRRKEQ
EEEEQKEREKEAERERNRQLEREKRREHSRERDRERDRERERDRGDRDRDRERDRERGRE
RDRRDTKRHSRSRSRSTPVRDRGGRR
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaatacccgagcagttccggaggaacccggggagttctgagtggtaat
cgaggggttgactatggtagtgggcggggtcagctgggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactagagcagcgaggcctagccaagagcgggcaaaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaaacactcgacaccccatgctgca
ttccagccaaattcccagattggtgaggaaatgagccagaacagtttcataaagcagtat
ctggaaaagcagcaggagttgcttaggcagcgtctggaacgtgaagctcgagaagctgca
gaacttgaagaagcctcagctgagtcggaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcgccccgaaagagctcctctatgtctgaagagaaaggtgaatctgatgatgagaga
ccaaggaaaggagaaagacgatcacctagagtcagacaggcaagagcagctaaactctct
gagtgcagccaggttgctgaggaggaagaggaccaagaagcaccttccagaaatctgagg
gtcagagcagatcaaaatttgcgaacagaggaggaagaagaggaggaggaggaggaagaa
gaagaggaggaggaggaagaggaaaatgagggacaaaagtctagagaggcaccactcctg
aaacagtttgaggaggaagaagaggaggaggaagtgtccagagcaaaaccagagggcgtg
atggatgagagacccaaaaccataagatcccaggagcaggaagggttcgagaaaggaggg
agagtgacaagatcccaggaagaaactagaagaagtcatctggccaggcatcagcaagag
aaggggatgaaaacaccttctccccttgaagaggaagaaggagaaacaagatcttttaaa
ggcttggagggaaaatcaaagtccccttcccctcctcagttgactgaagatctggagaag
gtccctcttgcgctacaaccagagcaaactgccagtgaggaggagactctcccaccttta
cttaccaaggaagcctcttcaccatcacctaatgcccagctccggagtgaagaagaagta
gagcccatggaaggcccagccccgcctgttctcgttcagctagctcctcctaatacagat
gctgaggccagggagctattaatagctcagcaccctgtccagttgatgggaggcctgtct
cctttgtcaagtcctacagacaccaaagtagaatcacctgcagagaaagtgccagaggag
agtgtcctgcctctagttcagaaaagcacactggctgaatcctcaatacagaagtgtctt
gaaactgaaccagaaaaatctgctgagccagtccccctaaaaattgaagaattagcacca
gccaaagggatcattgaggaatctctgaaacagccatctttggaacaaaaggaaggtaaa
agggcttctcatactcttctcccaagccacagttctaaacggtcagctgactcctcatcc
tctagccgatcttcctcatcttcatcctccagttctagatcaagatctcgttctcctgac
agctcaggctctcgatctcattcacctccaagatccaagcagagagatggatcccaggca
cgttcttaccccaaccctcgcagtagacccaagatggactccagatcaacttcagagtcc
aggtcacgttctcgttctcgttcccgttcccgttcagcgtcaagcaacagcagaaaatct
ctgagccctggaatctctagggacagcagcaccagctacactgaaaccaaagacccctct
tctggtcaggaggttgcaactcctccagtactgaaaaagcaggtccttgagccaaaggag
aggactaccacctcctcgtcctctatccgagtgaggcgtatgagccagcctgagccatcc
gaaaagcgtatgacccagaggttacaacctgagcaggggagcccaaagaagtgtgaagct
gaagaggcagagccaccagctgccacacagccccaaacctcagagactcagacctctcag
caaccagaatcagaaaggattcagcacactgttgaggagaaggaggaagtgaacatggac
acaactgaaaacagacctgaaaatgagattccagagccccccatgcctattgcagaccaa
gtcagcaatgatgaccgccctgagggcagtgccgaagatgaggagaagaaagagagctcg
ctgcccaaatcattcaagaggaagatctccgttgtctcagccaccaagggggtgccagct
ggaaacagtgacacagaggggggccagcctggtcggaaacgacgatggggagccagcacg
gccaccacacagaagaaaccctccatcagtatcaccactgaatcactcaagagcctcatc
cccgacatcaaacccctggcggggcaggaggctgttgtggatcttcatgctgatgactcc
cgcatctctgaggatgaaaccgagcgtaatggtgacgatgggacccatgacaaggggctg
aagatatgcagaacagtcactcaggtagtacctgcagaaggtcaggagaatgggcagaga
gaagaagaggaagaagagaaggagcctgaagcagaaccccctgtggctccccaggtttca
gtagaggtggccttgcccccacctgtggagcatgaagtgaaaaaagtgactttaggagat
accttaactcgacgttccattagccagcagaagtctggagtttccattacaattgatgat
cctgtcagaactgctcaggtgccctccccacctcggggcaagatcagtaatatagtccac
atctccaatctggttcgtcccttcacattaggccaactgaaggaattgttgggacgtaca
ggaaccctggtggaagaagccttctggattgacaagattaaatctcattgctttgtaacg
tactcaacagtagaggaagctgttgccacccgcacagctctgcatggggtcaaatggccc
cagtccaatcccaaattcctttgtgctgactatgctgagcaagatgagctggactatcac
cggggcctcttggtggaccgtccctctgaaactaaggcagaggagcagggagtcccacgg
cccttgcaccctccacccccacccccagcccagccaccacagcacccacgggcagagcag
cgggaacaggagcgtgcggtgcgggaacagtgggcagaacgggaacgggagatggagcgg
cgggagcgaactcgatcggagcgagaatgggatcgggacaaagttcgagaagggccccgt
tctcgatcacggtcccgtgaccgccgccgcaaggaacgtgcgaagtctaaagaaaagaag
agtgaaaagaaagagaaggcccaggaggaaccaccggccaagctgctggatgaccttttc
cgcaagaccaaggcagccccctgcatctactggctcccactgactgacagccagataatt
cagaaggaggcggagcgggctgaacgggccaaggagcgggagaagcggcgaaaggagcaa
gaagaggaagagcaaaaggaacgggaaaaggaagctgagagggaacggaaccgacagctg
gagcgagagaaacggcgagagcacagccgcgagagggacagggaaagagacagggaaagg
gaacgagaccggggggatcgagatcgagatagggagagggacagggaacgaggcagggag
agagatcgcagagacaccaagcgccacagcaggagccggagtcggagcacacctgtgcgg
gaccggggtgggcgccgctag
DBGET
integrated database retrieval system
