Loxodonta africana (African savanna elephant): 100673577
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Entry
100673577 CDS
T04351
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03015
mRNA surveillance pathway
lav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100673577 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
100673577 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100673577 (PABPC4L)
03041 Spliceosome [BR:
lav03041
]
100673577 (PABPC4L)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100673577 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
100673577 (PABPC4L)
Spliceosome [BR:
lav03041
]
Complex C
Other components
Complex C specific factors
100673577 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_Nup35
RRM_10
RRM_occluded
RBD_DEAH11
RBD_RDR6
RRM_MARF1
SET_assoc
RRM_3
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
100673577
NCBI-ProteinID:
XP_010588860
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MNVAAKYRMASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLH
VADAQKALDTMNFDVIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFST
FGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGTLLKNCRVFVSRFKSRKDRES
ELKNKASEFTNVYIKNFGDDMDDMRLKEVFSKYGTTLSVKVMTDSSGKSKGFGFVSFASH
EAAKNAVEEMNGKDINGQLIFVGRAQKKIERQAELKQMFEQLRQERFRRCRGVKLYIKNL
DDTIDDEKLRKEFASFGSISRVKVMQEEGRSKGFGLICFSSHEEAIKAMTEMNGRILGSK
PLNIALAQRNEERKTCFDNQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagcagccaagtaccgcatggcctctctgtatgtgggtgacctacacgcagat
gtcacggaggacctgttgtttaagaagttcagcaccgtggggccggtgttgtccatccgc
atttgcagggacctggtcacgcgccgctccctgggctatgcctatgtgaacttcctgcac
gtggctgatgcccagaaagccctggacaccatgaactttgacgtgataaaaggcaaatcc
atccgtcttatgtggtctcaacgtgatgcctacttaagaaaatctggaattgggaacgtg
ttcatcaagaatctggacaaatccattgacaataaaaccctttatgaacatttttcaact
tttgggaagattctatcctccaaggtgatgagtgatgatcaaggctccaagggctatgca
tttgtgcactttcagaaccagagtgctgcagacagggccattgaagagatgaatgggacc
ctgctcaagaactgcagagtgtttgttagccgattcaaaagccgcaaagatcgagaatct
gagctcaaaaacaaagccagtgaattcaccaatgtttacatcaaaaactttggagatgac
atggatgatatgagactgaaggaagttttcagcaaatatggtacaactctgagtgttaag
gtgatgacagattccagtggcaaatccaaaggctttggctttgtgagttttgctagccat
gaggctgccaaaaatgctgtggaagaaatgaacggcaaggacataaatgggcagctgata
tttgtaggccgagcccaaaagaagatagagcgacaggctgagttaaagcaaatgtttgag
cagctgagacaagaaagatttcgccggtgccggggagtgaagctctatattaagaacctt
gatgacaccattgatgatgaaaaactacggaaggaatttgcttcatttggatcaattagc
agagttaaggtaatgcaggaagaaggccgaagtaaagggtttggcttgatctgcttctcc
tctcatgaggaagctattaaagcaatgactgagatgaatggccgcatcttgggctccaag
cctctcaacatagccctagcccagaggaatgaagaaagaaaaacatgctttgacaaccaa
tag
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integrated database retrieval system
