Loxodonta africana (African savanna elephant): 100673927
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Entry
100673927 CDS
T04351
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X2
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
100673927
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100673927
Ion channels [BR:
lav04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100673927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
100673927
NCBI-ProteinID:
XP_003405868
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINITSFFSSSL
DVNGTIINRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGL
GVFSESSSVVSKLSSKSEKEMKNRRKKKKQKEQSGEEEKEERFRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPIGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTAKQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKR
NIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTVEISKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNVRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCICKKDKGKEGDGTPIKEDTLIDKLHENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtacctccaggacctgacagcttccgcttcttcaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaagag
cgcaaggatgaagatgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatttatggagacattcctccagagatggtatcagagcctctggaggat
ctggacccgtactatattaataagaaaacatttatagtattgaataaagggaaagcaatc
tctcggttcagtgccacccctgccctgtacattttaactcccttcaaccctattagaaaa
ttagctattaagattttggtacattctttattcaacgtgctcatcatgtgcactattctg
accaactgtgtgtttatgaccatgagtaaccctcctgactggacaaagaatgtggagtac
acatttacaggaatttatacttttgaatcacttataaagatacttgcaaggggcttttgt
ctagaagatttcacatttctacgggatccctggaattggttggatttcacagtcatcact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcattgaaaaccatttcagtcatcccaggcttgaagaccattgtgggggcc
ctgatccagtcagtgaagaagctctcagatgtcatgatcctgactgtgttctgtctgagt
gtgtttgcgctaattgggctgcagctgttcatgggcaacctgaggaataaatgtttgcaa
tggcccccagataattctacctttgaaataaacatcacttccttctttagtagttcattg
gatgtgaatggtaccattatcaataggacagtgagcatgtttaactgggatgaatatatt
gaggataaaagtcatttttattttttggaagggcaaaacgatgctctgctttgtggcaac
agctcagatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtagaaacccc
aactatggctacacaagctttgacacctttagttgggccttcttgtccttatttcgactc
atgactcaagacttctgggaaaacctttatcaactgacactacgtgctgctgggaaaaca
tacatgatattttttgtgctggtcattttcttgggctcattctacctaataaatttgatc
ctggctgtggtggccatggcctatgaggaacagaatcaggcaacacttgaagaagctgaa
cagaaagaagctgaatttcagcaaatgctcgaacagttaaaaaagcaacaagaagaagct
caggcagcggcggcagcagcatccgctgaatcaagagacttcagtggtgctggcgggtta
ggggttttctcagagagttcgtcggtagtatccaagttgagctccaagagtgaaaaagag
atgaaaaacagaaggaagaagaagaaacagaaagaacagtctggagaagaagagaaggaa
gagaggttccgcaaatctgaatccgaagacagcataagaagaaaaggtttccgtttttcc
ttagaaggaagtagattgacatatgaaaagaggttttcttctccacaccagtctttattg
agcatccgtggctcccttttctccccaagacgcaacagtcgggcaagccttttcagcttc
agaggtcgagcaaaggatattggctctgagaatgactttgcggatgatgagcacagcacc
tttgaagacaatgacagccgaagagactctctgtttgtgccgcacagacatggagagcgg
cgccacagcaacgtcagccaggccagccgcgcctccagggtgctccccattctgcccatg
aacgggaagatgcacagtgctgtggattgcaacggcgtggtctctctggtagggggcccc
tctgccctcacatctcccattgggcagctcctgccagagggcactactactgaaacagaa
ataagaaagaggagatccagttcttaccatgtttccatggatttgttagaagaccccaca
gcaaagcaaagagcaatgagtatggccagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccttgctggtacaaatttgcaaacatgtgtttgatctgg
gactgctgtaaaccatggttaaaggtgaaacaccttgtcaacctggtcgtgatggaccca
tttgttgacctagccatcaccatctgcattgtcttaaatacactcttcatggctatggaa
cactatcccatgacagagcagttcagcaatgtattgtccgttggaaacctggtcttcact
gggatcttcacagcagaaatgtttctcaagataatcgccatggatccctattattacttc
caagaaggctggaatatttttgatggttttattgtgagccttagtttaatggaacttggt
ttggcaaatgtggaaggattgtcagttctccgatcattccggctgctccgagttttcaaa
ttggcaaaatcttggccaactttgaatatgctgataaagatcattggaaattcagtgggg
gctctaggcaacctcaccttggtgttggccatcatcgtcttcatttttgccgtggtcggc
atgcagctatttggtaaaagctacaaagaatgtgtctgcaagatctccagcgactgtgaa
ctcccacgctggcacatgcatgacttcttccactccttcctgattgtgttccgtgtgctg
tgtggggagtggatagagaccatgtgggactgtatggaggtcgctggccaaaccatgtgc
cttactgtcttcatgatggtcatggtcattggaaacctagtggttctgaacctcttcctg
gccttgctcttgagttcatttagttctgacaatcttgccgccactgatgatgataatgaa
atgaacaatctccagattgctgtgggaaggatgcagaagggaatcgattatgttaaaaga
aatatacgtgaatttattcagaaagcctttgttagaaagcagaaagctttggatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaatcataccacggta
gaaataagcaaagacctcaattatctcaaagatggaaatggaactacgagtggcataggc
agcagtgtagaaaaatatgtcgtggatgaaagtgattacatgtcatttataaacaacccc
agcctcactgtgactgtaccaattgctgtcggagaatctgactttgaaaatttaaatact
gaagaattcagcagcgaatcagatatggaagaaagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcacagttgatataggagctcctgctgagggagaacaacctgaggct
gaacccgaagaatccctggaacctgaagcctgttttacggaagactgtgtacggaagttc
aagtgttgtcagataagcatagaagaaggcaaagggaaactctggtggaatgtgagaaaa
acttgctataagatagtggagcacaattggttcgaaaccttcatcgtcttcatgattctg
ctcagcagtggggcgctggcctttgaagatatatatattgaacagcgaaaaaccattaag
acgatgttagaatatgccgacaaagttttcacttatatattcattctggaaatgcttctg
aagtgggttgcgtacggttttcaaatgtattttaccaatgcctggtgctggctagatttc
ctgattgtcgatgtttcattggtgagcttaacagcaaatgccttgggttactcagaactt
ggtgccatcaaatccctgagaacactacgagctctgcggccactgagagccttatcccgg
tttgaaggaatgagggttgttgtaaatgctcttttaggagccattccatctataatgaat
gtacttctggtttgtctcatcttttggctaatattcagtattatgggagtgaatctcttt
gctggcaaattttaccattgtattaactataccactggagagatgtttgatgtaagcgtg
gtcaacaactacagtgaatgtaaagcccttatagagagcaatcaaactgccaggtggaaa
aatgtgaaagtaaactttgataacgtgggacttggttacctttctctgcttcaagtagcc
acatttaaggggtggatggatatcatgtatgcagctgttgactcacggaatgtagaattg
caacccaagtatgaagacaatctatacatgtatctttattttgtcatttttattattttt
ggttcattctttactctgaatctcttcattggtgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaaactcggttcaaagaaaccacaaaaacccattcctcgacctgctaacaaa
ttccaaggaatggtctttgattttgtaaccaagcaagtctttgatatcagcatcatgatc
ctcatctgcctcaacatggtcaccatgatggtggaaactgatgaccagagtcaagaaatg
acaaacattctatactggatcaatttggtatttattgttctattcactggagaatgtgtg
ctgaagctgatctctcttcgttattactatttcaccattggatggaatatttttgatttt
gtggtagtcattctctctattgtaggtatgtttctggctgagcttatagaaaaatatttt
gtgtcccctaccctgttccgagtgatccgtcttgccaggattggtcgaatcctgcgtctg
atcaaaggagcaaaggggatccgcacgttgctctttgctttgatgatgtccctccctgcg
ctgtttaacatcggcctcttgctcttcctggtcatgttcatctacgccatctttggaatg
tccaactttgcttatgttaagagagaagttggaattgatgacatgttcaactttgaaacg
tttggcaacagcatgatctgcctgttccagattaccacctctgctggctgggatggattg
ttggcacccattcttaatagtggaccacctgactgtgaccctgaaaaagaccaccctgga
agttcagttaagggagactgtggtaacccatctgtggggattttcttctttgtcagctac
atcatcatatcattcctggttgtggtgaacatgtacattgctgtcatcctggagaacttc
agtgttgctactgaagaaagtgcagagcccctgagtgaggatgactttgagatgttctac
gaggtttgggagaagtttgatcctgatgccacccagtttatcgagttctccaagctttct
gattttgcggctgccctggatcctcctcttctcatagcaaaaccaaacaaagttcagctc
attgccatggatctgcccatggtcagtggtgaccgaatccactgcctggacattttgttt
gcttttacaaagcgcgttttgggtgagagtggagagatggatgcccttcgaatacagatg
gaagagcgattcatggcatcgaatccctccaaagtctcttatgagcccattacgaccact
ttgaaacgcaaacaagaggaggtgtctgctatcgttatccagagggcttatagacgctac
ctcttgaagcagaaagttaaaaaggtttcatgtatatgtaagaaagacaaaggcaaagaa
ggtgatggaacacctatcaaagaagatacccttattgataaactacatgagaattcaact
ccagagaaaaccgatgtgacaccttccaccacttccccaccttcgtatgatagtgtgaca
aagccagagaaagaaaaatttgaaaaagacaaatctgaaaaggaagacaaagggaaagat
atcagggaaagtaaaaagtaa
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integrated database retrieval system
