Loxodonta africana (African savanna elephant): 100674036
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Entry
100674036 CDS
T04351
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03013
Nucleocytoplasmic transport
lav03015
mRNA surveillance pathway
lav03040
Spliceosome
lav05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100674036 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
100674036 (NCBP1)
03015 mRNA surveillance pathway
100674036 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100674036 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100674036 (NCBP1)
03041 Spliceosome [BR:
lav03041
]
100674036 (NCBP1)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100674036 (NCBP1)
Spliceosome [BR:
lav03041
]
Common components
Common spliceosomal components
Cap binding complex
100674036 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1690
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
100674036
NCBI-ProteinID:
XP_003407893
UniProt:
G3SXB3
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRQDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHIPMLQVWTADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVVFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLSVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMSKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTNVLTPWYKNCIERLQQIFLQHHLIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgaaaacgatgggggccagcctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcctagctggtgttttggaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcgcgtctcttacct
gagaagttgacgatttatacaacattagtcggactgctgaatgccaggaattacaacttt
ggtggagaatttgtagaagccatgattcgtcaacttaaagaatcactgaaagcgaacaac
tataatgaagccgtatatttggttcgctttttatctgatcttgtgaactgtcacgtaata
gctgccccatcaatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtacctcaggtgcggcaggattggtatgtgtatgcatttctatcgtctttgccctgggtt
ggaaaggaattgtacgaaaagaaagatgcagaaatggaccgcatctttgccaacactgaa
agctatctgaaaagacgccaaaagactcatatacccatgttacaagtatggactgctgat
aaaccacatccccaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgctggcaggaacggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagccctgcagcacaatctgcctccttttactccacctcctcacacggaagactcg
gtgtacccgatgccgcgggtcgtctttaggatgtttgattacacggatgaccctgagggt
cctgttatgccagggagtcattccgtggaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccactggaaggaaaggaagacgtgtgccgcacaactagtgagctatcca
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
cagcttccagcaccccctcacattgatgtgatgtatacaacacttcttattgaactgtgc
aaacttcaacctggctctctgccccaagttcttgcacaggcaactgaaatgttatacatg
cgtttggacacaatgaatacaacatgcgtagataggtttattaattggttctcccatcat
ctaagtaactttcagttccgttggagctgggaagattggtcagattgtcttactcaagat
cctgaaagtcccaaaccaaagtttgtaagagaagtactggaaaaatgtatgaggttgtct
taccatcagcgtatattagatatcgttcctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaattctcttcctggacattctgtt
gccctctgtttatctgttgcctttaaaagtaaggcaaccaatgatgaaatcttcagcatt
ctgaaagatgtaccaaatcctaaccaggatgatgacgacgatgaaggattcagttttaac
ccactgaaaatcgaagtctttgtacagactctgctacacttggcagccaaatcattcagc
cactccttcagtgctcttgcgaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaggggaagttacatgtcctaagagttatgtttgaggtctggcggaaccatccacagatg
attgctgtactagtagataagatgattcgtacacagattgttgactgtgctgcagtagca
aattggatcttctcttcagaactatctcgtgactttactagattgtttgtttgggaaatc
ttgcactccacaattcgtaagatgagcaaacatgttctgaagatccagaaagagctagaa
gaagctaaagaaaaacttgcaaggcaacacaaacggcgaagtgatgatgatgacagaagc
agtgacaggaaagatggggctcttgaggagcaaatagaaaggctacaggaaaaagtggag
tcagctcagagtgaacaaaagaacctcttccttgtcatatttcagcgttttatcatgatc
ttgactgagcacttggtacgatgtgaaactgatgggaccaatgtattaacaccatggtat
aagaactgtatagagaggctccagcagatcttcttacagcatcacctaataatccagcag
tacatggtgaccctggagaaccttctcttcaccgctgaattagaccctcacatcctggct
gtgttccagcagttctgtgccctgcaggcctaa
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