Loxodonta africana (African savanna elephant): 100674242
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Entry
100674242 CDS
T04351
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X2
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04360
Axon guidance
lav04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100674242 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
100674242 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100674242 (TRPC4)
Ion channels [BR:
lav04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100674242 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100674242
NCBI-ProteinID:
XP_003412685
UniProt:
G3SMS9
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MAQFYYKRNVNAHCRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHRK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNGLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALHPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQSANGAKESPNSADSDEK
SDNEGTSKDKKKNFSLFDLTTLIHPRSAAITSERHNISNGSALGMQEAPREKQRKANFVT
DIKNFGLFHRRSKQNAAELNASQIFSVSEEVARQQAEGGPSERNIQLESRALVSRNDLNI
PGLSEQCVLVDHRERNTDTLAVQVGKRVCSFKSERVVVEDTVPIIPKEKHTKEEDSSTDY
DLSLTETVTHGDYVTTRL
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaagagaaatgtgaatgcccactgccgagatcgcatcccacta
aggatcgtccgagcagaatcagaactctcgccctcagaaaaagcctatttgaatgctgtg
gagaagggggactatgcaagtgtcaagaaatccctagaggaagctgaaatttattttaaa
attaatattaattgcattgaccctcttggaagaactgccctcctcatcgcaattgaaaac
gagaacctggagctcattgaactgctcctgagcttcaatgtttatgtcggagatgctctg
ttacacgctatcagaaaggaagtggtgggagctgtagagctgttgctgaaccacagaaag
ccaagtggagaaaaacaggtacctcccatactcctggataagcagttctctgaattcact
ccagacataacaccaatcattttggctgcccatacaaataattatgagataataaaactt
ttagttcagaaaggagtctcggtgccccggccccatgaggtccgctgtaattgtgttgaa
tgtgtctcgagttcagacgtagacagtctccgccactcacgctccagactcaacatctac
aaggccttggccagcccctccctcatcgcgctgtccagtgaagaccctttcctcacagcc
tttcagttaagttgggagctgcaggaattgagcaaggtggaaaatgaattcaagtcagag
tatgaggagctgtcacggcaatgcaaacaatttgctaaggaccttttggatcagacaagg
agttccagagaactggaaatcattcttaattaccgagatgacaacggtctgatagaagaa
caaagtggaaatgatctcgcgagattaaaattggctattaagtaccgtcaaaaagagttc
gttgcccagcccaactgtcagcagctgcttgcatctcgctggtacgatgagtttccaggc
tggaggagaagacactgggcagtgaagatggtgacgtgtttcataataggacttcttttt
cctgtcttctctgtgtgctacctgatagctcctaaaagcccacttggactgttcatcaga
aagccgtttatcaagttcatctgccacacagcttcctatttgacatttttgttcctgctt
ctgcttgcctctcagcacattgacaggtcggacttgaacaggcaagggccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggtggactccaagattacatccatgattggtggaatctaatggactttgtg
atgaactccttatatttagcaacaatctccttgaaaattgttgcatttgtaaagtacagt
gcccttcatccacgagaatcctgggacatgtggcatcccacgctggtggccgaggcatta
ttcgctattgcaaacatcttcagctccctgcgcctgatctcactgttcactgcaaattct
cacctgggacctctgcaaatatccctaggaagaatgcttctcgacatcttgaagttccta
ttcatatactgccttgtgttgctagcatttgcaaatggcctaaaccaattgtacttttat
tatgaggaaacaaaagggttaagctgcaaaggcatacggtgtgaaaagcagaataatgca
ttttcaacgttatttgagacgctgcagtccctgttttggtcaatatttgggctcatcaat
ttatatgtgaccaacgtcaaagcacagcatgaattcactgagtttgtgggtgccaccatg
tttgggacatataatgtcatctctctggttgtcctactcaacatgctaatagcaatgatg
aataattcttaccaacttattgctgaccatgcagacatagaatggaaatttgctcgaaca
aagctttggatgagttattttgaagaaggaggtactctgcctactcccttcaatgtcatc
ccgagcccgaagtctctctggtacctgatcaaatggatatggacacacctgtgcaagaaa
aagatgagaagaaagccagaaagctttggaacaatagggaggcgagctgctgataacctg
agaagacatcatcaataccaggaagtgatgaggaacctggtgaagcgatatgttgccgca
atgattcgagatgctaaaaccgaggaaggccttacagaagagaactttaaggagctcaaa
caagacatttctagctttcgttttgaagttctgggattactaagaggaagcaaactttcc
actgtgcaatctgctaatggtgcaaaggagtctcccaattctgcagactcagatgaaaaa
agtgacaatgaaggcaccagtaaggacaagaaaaagaatttcagtctctttgatctaaca
actctgattcatccgaggtcagcagcaatcacctctgaaagacataacataagcaatggc
tctgccctggggatgcaggaggccccaagggagaagcaaaggaaagcgaattttgtgaca
gatatcaaaaactttgggttatttcatagacgatcaaaacaaaacgctgctgagctaaat
gcaagccaaatcttctctgtttcagaagaagttgctcgtcaacaggctgaaggtggaccc
tctgagagaaatattcaactggaatcccgagcattagtttccaggaatgacttgaacatt
cccggtctcagtgaacagtgtgtgttagtggaccacagagaaaggaatacggacacattg
gctgtgcaggtaggcaaaagagtgtgttccttcaagtcagagagggtggtggtggaggac
actgtccccatcataccaaaggagaagcacaccaaggaggaggactctagcacagactat
gacttgtccctcacagaaacagtcacccatggagattacgtgacgacaaggttgtga
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