Loxodonta africana (African savanna elephant): 100674335
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Entry
100674335 CDS
T04351
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03250
Viral life cycle - HIV-1
lav04623
Cytosolic DNA-sensing pathway
lav05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100674335 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100674335 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100674335 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lav03400
]
100674335 (SAMHD1)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100674335 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
HD_assoc_2
PDEase_I
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
100674335
NCBI-ProteinID:
XP_003411748
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MQSAEPEQPCKRPRRDGSPRSPQNTQTAAAPESPERELHPDPKTWGPEQVCAFLRRSGIG
SDPLLQTRFRENKITGSLLPFLDESLLENLGVSSSKEREKLLHHIQRLSQTQVDTVKVIN
DPIHGHIELHPLLIRIIDTPQFQRLRYIKQLGGSYYVFPGASHNRFEHSVGVGYLAGCLV
RALRDKQPELQISDRDVLCVEIAGLCHDLGHGPFSHMFDGRFIPLARPEIKWKHEQGSVK
MFEHLVDSNGLREVMKQYNLIPEEDICFIKEQITGPLESPTKSLWTYKGRPKEKSFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYRRFIKFARVCEVDNKKHICTRDKEVGNLY
DMFHTRNSLHRRAYQHKVGNIIETMITDAFLEADPYIEITGAQGRKYRLSTAIDDVEAFT
KLTDNIFLEILYSTDPRLDVAREILKKIECRKLYKYVGQTQPKGQVKIKKEHYESLPQDV
ANAKPDPDIVLQAELKAEDFIVDVINMDYGMEDKNPIDHVFFYCKNDPNKAIRITKDQVS
QLLPERFAEQLIRVYCKKTDNRSLYAAQQHFVQWCSIRGFTKPQDSDVIAPLITPRKQEW
NCPDSSESSTHHNEASKSRVHLFKD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcgctgagccggagcagccctgcaagcggccccgacgcgatgggagcccgaga
agcccgcagaacacccagactgcagcggcgccagaatccccggagcgcgaactccacccc
gaccccaagacctggggccctgagcaggtgtgcgcctttctaaggcgcagtggcatcggt
agtgaccctctgctgcagacacgtttccgagaaaataaaatcacgggttcactactgccg
tttcttgatgagtctcttcttgaaaatcttggagttagttcctcgaaagagagagagaag
ctgcttcatcatattcaaagactgagtcaaactcaagttgatacagtgaaggttattaat
gatcctatccatggccacattgagctccatcctcttctcatccgaatcattgacacacct
caatttcagcggcttcgatacattaaacagttgggagggagttactatgtttttccagga
gcttcccacaaccgatttgagcatagtgtgggggtagggtacctagcaggatgtctagtt
cgcgcactgcgtgacaaacagccagagctgcagataagtgaccgagatgtgctctgtgtt
gagattgctgggctttgtcatgatcttggtcatggaccattttctcacatgtttgatgga
agatttattccacttgcccgccctgagataaaatggaagcacgaacagggctcagtcaag
atgtttgagcatctagttgattctaacggactcagagaagtcatgaaacagtataatctc
atccctgaagaagatatttgttttatcaaggaacaaattacaggaccacttgaatcccca
acaaagtctttgtggacatataaagggcgtcctaaagagaaaagcttcctctatgagata
gtggctaataaaagaaatggcattgatgtggacaaatgggattattttgccagggactgc
catcatctcggaatccaaaataattttgattacaggcgctttattaagtttgcccgtgtc
tgtgaagtagataacaagaagcatatttgtactagagataaggaagttgggaatctgtat
gatatgttccacacacgcaactctttacaccgcagagcttaccaacacaaagttggcaac
atcattgagacaatgattacagatgctttcctcgaagcagacccctacatagagattaca
ggtgcccaaggcagaaagtaccgtctgtctacagccattgatgacgtggaggccttcact
aagctaacagataacatttttctggagattttatactctactgatcccagattggacgta
gcacgagagattttaaaaaaaatcgaatgccgcaaactgtacaagtatgtgggtcagact
cagccaaagggacaagtaaagattaaaaaggaacattatgaatcccttccacaagacgtt
gctaatgctaaacctgaccctgatatagtgctacaagctgagctgaaggctgaagatttc
atagtggacgttatcaacatggattatggaatggaagacaagaatcctattgatcacgtt
ttcttctattgtaagaacgatcccaacaaagcaatcaggattactaaagatcaggtttca
cagctcctccctgagagattcgcagagcagctgattcgagtgtactgtaagaagacggat
aacaggagtttgtatgccgcacagcagcattttgttcagtggtgctcaatcagaggtttc
accaagccacaggatagtgatgttatcgccccacttataacacctcgaaaacaggagtgg
aattgcccagattcatccgagagttcaactcaccacaacgaagcatccaaatccagagtc
catctttttaaggactga
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