Loxodonta africana (African savanna elephant): 100674437
Help
Entry
100674437 CDS
T04351
Symbol
VPS16
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04140
Autophagy - animal
lav04148
Efferocytosis
lav05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100674437 (VPS16)
04148 Efferocytosis
100674437 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100674437 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100674437 (VPS16)
Membrane trafficking [BR:
lav04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100674437 (VPS16)
Hops complex
100674437 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
100674437
NCBI-ProteinID:
XP_003411664
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SVRPVLEIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRSFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTVSANVGDLKLRRMPEVPGLQSAPSCW
TPLCQERAAHILLAVGPELYLLDHTTYSIVTPPGLVSGVISFLLMAVFLXYLHLALFTDT
GHIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSHSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHENRPDMQKNLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAVRDFHIGIPLTYSQYKQLTIQVLLDRLVSRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYTVEERIEGRVAALHMAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFR
IPDKRLWWLKLTALAHLDDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccgctcggggactctgccttttaccggaaatat
gagctgtacagcatggattgggacctgaaggaggaactccgggactgcctggtggccgct
gcaccctatggaggccccattgcactgctgaggaatccctggcggaaggaaaaggctgcc
agtgtgcgaccagtgctcgagatctactcagcttctggcatgcctttggccagtctgctg
tggaagagcgggcccgttgtgtccctgggctggtcagctgaggaggagctgctctgtgtg
caggaagatggtgtagtgctggtttacgggcttcacggtgactttcggagatccttcagc
atgggcaatgaagtactccagaatcgggttctggatgcccgtattttccacacggagttt
ggttctggggtggccatcctcacaggagcccaccgcttcaccgtcagtgccaatgtgggc
gacctcaagctccgtcggatgccagaggtgccaggcttgcagagtgcaccctcgtgctgg
accccattgtgccaggagcgagcagcacacatccttctggctgtgggtcctgaactttac
ctcctggaccacaccacctactccattgtgacaccccctggcctggtctcaggagtgatc
agctttctgctgatggcagtttttctcncctacctgcacctggcactcttcacagacacg
ggccacatctggatgggcacagcatcactcaaggagaagctgtgtgagttcaactgcaac
atccgggcccccccaaagcagatggtctggtgcagccgtcctcgcagcaaggagagagcc
gttgtggtggcctgggaaaggcggctaatggtggtgggtgatgcgcccgagagcatccag
tttgttctggatgaggactcatacctggtgcctgagctcgacggagtccgcatcttctca
cacagcacccatgagtttctgcatgaggttccagtggccagtgaggagatctttaaaatt
gcctcgatggcccctggagcactgctgttggaggcccagaaggagtatgagaaagagagc
cagaaggcagacgagtacctgcgggagatccaggagctggggcagctgacccaggctgtg
cagcagtgcatcgaggccgcaggacacgagaaccggccagacatgcagaagaacctgctc
agggcggcctccttcgggaagtgtttcctcgacagatttccacccgacagctttgtgcgc
atgtgtcaggacctgcgtgtgctcaatgccgtgcgggactttcacattggcatccccctc
acctacagccaatacaagcagctgaccatccaggtgctgctggacaggctcgtgtctcgg
agactttatcccctggccatccagatatgcgagtacctgcgtcttcctgaagtgcagggc
gtcagcaggatcctggcccactgggcctgctataaggtacaacagaaagatgtgtctgac
gaggatgttgctcgggccattaaccagaaacttggggacacacctggtgtctcctactct
gacattgctgcacgggcctatggttgtggccgcacagagctggctattaagctgctggag
tatgaaccacgctccggggagcaggtacctcttctcctaaagatgaaaaggagcaaactg
gcactgagcaaggccatcgagagtggggacactgacctggtgttcacggtgttgctgcac
ctgaagaacgaattgaaccgaggcgatttcttcatgacccttcggaaccagcccatggcc
ctgagtttgtaccgacagttctgtaagcaccaggaactagagactctgaaggacctttac
aatcaggatgacaatcaccaggagctgggcagcttccacattcgggccagctacactgtc
gaggagcgtattgaggggcgagtagcagctctgcatatggcagctgacgccttctacaaa
gccaagaatgagtttgcagccaaggccacagaagatcagatgcggctcctgcggctgcag
cggcgcctagaagacgagctggggggtcagttcctagacctgtctctacacgacacagtc
actaccctcatcctcggtggccacaacaagcgtgcagagcagctggcacgtgacttccgt
atccctgacaagaggctctggtggctgaagctgacggccctggcgcatctggacgactgg
gaggagctggagaagttttctaagagcaagaaatcacccatcggctacctgccctttgtg
gagatctgcatgaagcaacacaacaaatacgaggccaagaagtacgcttcccgcgtgggt
cctgagcagaaagtcaaggccttacttcttgttggggatgtggctcaggccgcagacgtg
gccattgagcaccgaaacgaggctgagctgagcctcgtgttgtcccactgcactggagcc
acggatggggccacagctgacaagattcagcgggccagggcacaagctcagaagaagtga
DBGET
integrated database retrieval system
