KEGG   Loxodonta africana (African savanna elephant): 100674736
Entry
100674736         CDS       T04351                                 
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X2
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100674736 (DHX8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lav03041]
    100674736 (DHX8)
Enzymes [BR:lav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     100674736 (DHX8)
Spliceosome [BR:lav03041]
 Complex C
  Other components
   Step II factors
    100674736 (DHX8)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C S1 Helicase_C HA2_N DEAD AAA_22 AAA_19 nSTAND3 Flavi_DEAD T2SSE AAA_16 TsaE PhoH Sigma54_activ_2 OB_RRP5_4th ABC_tran Cas3-like_C_2
Other DBs
NCBI-GeneID: 100674736
NCBI-ProteinID: XP_010592798
LinkDB
Position
Unknown
AA seq 1125 aa
MRPPAKPSTSKDPVVKPKTEKEKLKELFPVFCQPDNPSVRTMLDEDDVKVAVDVLKELEA
LMPSAAGQEKQRDAEHRDRTKKKKRSRDRDRDRERDRDRDRDHKRRHRSRSRSHSRTRER
NKGKSRYRSRSRSQSPPKDRKDRDKYGERSLDRWRDKHVDRPPPEEPAIGDIYNGKVTSI
MQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSM
KDVDQETGEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRIS
DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQ
SMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPD
AEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLV
QAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFG
CCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD
VLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETD
YLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSA
LPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLV
VTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAM
GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIM
SVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNN
KFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNA
AKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVE
FAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq 3378 nt   +upstreamnt  +downstreamnt
atgcggcctccagcaaagccttctactagcaaagatccagttgttaaacccaaaaccgag
aaagaaaagctgaaggaactcttcccagtcttttgccaaccagacaacccttccgttcgg
accatgttggatgaggacgacgtgaaagtcgctgtggacgtcctgaaagaactggaagcc
ttaatgcccagcgcagcaggccaggagaagcagagagacgctgagcaccgggacaggaca
aagaagaagaagcggagccgagatcgagacagagacagagagcgggacagagacagagat
agagaccataagcggagacaccggtcccgttctcgatcacattccaggacccgggagagg
aataaagggaagtctagatatcggtccaggagtagaagtcagagtccccccaaagaccgc
aaggaccgggacaaatatggggagaggagtctggacagatggcgggataagcatgtggac
cgccctccccctgaggagcccgccatcggggacatttacaatggcaaagttaccagcatc
atgcagttcgggtgctttgtgcagctggaaggactaaggaagcggtgggaagggctggtg
cacatttctgagctccggcgagaaggccgagtagccaatgtggcggatgtggtgagcaaa
ggccaaagggttaaggtcaaagtgctgtccttcaccgggaccaagactagcctgagcatg
aaggatgtagaccaagagactggagaagatctgaacccaaaccgacgacgaaatcttgtt
ggggagaccaatgaggagacctcaatgcggaatcctgacagacccactcacctgtccctc
gtcagtgcccctgaagtagaggatgactcgctagagcgcaagcgcctcacccgcatctct
gacccagagaagtgggagatcaaacagatgattgctgccaatgtcctttccaaagaagag
tttccagactttgatgaagagacaggcattctccctaaggtggatgatgaagaagatgag
gaccttgagatcgaactggttgaggaagagcctccattcctaagagggcacaccaagcag
agtatggacatgagccctattaaaatcgtcaagaacccagatggctccctctcccaagca
gccatgatgcagagtgccttggctaaagaaaggcgggaactcaagcaggcccagcgggaa
gctgagatggattctattcccatgggactcaacaaacactgggttgatcctttgcctgat
gcggaaggcaggcagattgctgccaacatgaggggtattgggatgatgcccaatgacatt
cctgagtggaagaaacatgcctttgggggcaacaaagcgtcttacgggaaaaaaacccag
atgtcaatcattgagcagagggagagcctgcccatctacaaacttaaggaacagctggtc
caggctgtccatgacaatcagatcctgattgttattggagagacaggatctgggaagaca
acgcagatcacccagtacctagcggaggcaggctacacgtccaggggcaagatcggatgt
acccagcccagaagagtggcagccatgtcagtggccaaaagagtgtcagaggagtttggt
tgttgcttaggccaagaggtgggctacactatccgatttgaggactgcaccagccccgaa
acagtcatcaagtacatgacggacgggatgctgctcagagagtgcctgattgaccccgac
ctcactcagtatgcgatcatcatgttggacgaggcacacgagagaaccattcacactgac
gtgctctttggattgttgaaaaagacggttcagaaacggcaggacatgaagctgattgtc
acctcagccaccttggatgcagtgaagttttctcagtacttctatgaagctcccattttc
accatcccgggccgaacttacccagtagaaatactgtacacaaaggaacccgagacagat
tatctggatgccagcttgatcactgtcatgcagatccacttaacagagccaccaggtgat
atcctggtcttcttgacgggtcaggaggagattgatactgcttgtgagatcctgtatgag
cgaatgaaatccctgggacctgatgttcccgagttaattatcctcccggtgtactccgcc
cttcccagtgagatgcagacccgaatctttgaccctgctccacctggcagcagaaaggtc
gtgattgccaccaacattgcagagacatcactgactatcgatggcatctactacgtggtg
gaccctggattcgtgaagcagaaagtgtacaactctaagacagggatcgaccagcttgtg
gtgacgcctatttctcaggctcaggcaaagcaacgagctggcagagctgggagaacaggc
ccagggaagtgctacaggctgtacacggaacgggcctacagagacgaaatgctgaccacc
aacgtgccagagatccagagaaccaacttagcaagcacggtgctctctctcaaggccatg
ggcatcaatgacctgctgtccttcgacttcatggatgccccgccaatggaaaccttgatc
acagccatggagcagttgtacacactgggggctctagacgacgagggcctgctcactcgc
ctaggccgcaggatggcagagttccctctggagccaatgctgtgcaaaatgctgatcatg
tcagtgcatctgggatgcagtgaggagatgctgaccatcgtgtccatgctgtctgtgcag
aatgtcttctacaggccgaaggataaacaagccctcgcagaccagaagaaggccaaattc
caccagaccgaaggggaccacctgaccctgctggctgtgtacaactcctggaagaacaac
aagttctccaacccctggtgctacgagaacttcatccaggctcgctccctgcgccgggcc
caggatatccgcaagcagatgctaggcataatggatagacacaagctggatgtagtctcc
tgtggtaagtccacagtccgagtacagaaggccatctgcagtggattcttccggaatgct
gccaagaaagacccgcaggagggttaccggacactgattgaccagcaggtggtctatatc
catccttccagtgcactcttcaacagacagccggaatgggtggtgtaccacgagctggtg
ctgaccacaaaggagtacatgcgtgaggtcactaccatcgatccccggtggcttgtggag
ttcgccccagccttcttcaaggtctctgacccgaccaaactaagcaagcagaagaagcag
cagcgccttgagcccctgtacaaccgctatgaggagcccaatgcctggcgaatatcccgg
gccttccggcggcgctga

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