Entry |
|
Symbol |
DHX8
|
Name |
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X2
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KO |
|
Organism |
lav Loxodonta africana (African savanna elephant)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:lav00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100674736 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:lav03041]
100674736 (DHX8)
Enzymes [BR:lav01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100674736 (DHX8)
Spliceosome [BR:lav03041]
Complex C
Other components
Step II factors
100674736 (DHX8)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
1125 aa
MRPPAKPSTSKDPVVKPKTEKEKLKELFPVFCQPDNPSVRTMLDEDDVKVAVDVLKELEA
LMPSAAGQEKQRDAEHRDRTKKKKRSRDRDRDRERDRDRDRDHKRRHRSRSRSHSRTRER
NKGKSRYRSRSRSQSPPKDRKDRDKYGERSLDRWRDKHVDRPPPEEPAIGDIYNGKVTSI
MQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSM
KDVDQETGEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRIS
DPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQ
SMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPD
AEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLV
QAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFG
CCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTD
VLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETD
YLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSA
LPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLV
VTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAM
GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIM
SVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNN
KFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNA
AKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVE
FAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR |
NT seq |
3378 nt +upstreamnt +downstreamnt
atgcggcctccagcaaagccttctactagcaaagatccagttgttaaacccaaaaccgag
aaagaaaagctgaaggaactcttcccagtcttttgccaaccagacaacccttccgttcgg
accatgttggatgaggacgacgtgaaagtcgctgtggacgtcctgaaagaactggaagcc
ttaatgcccagcgcagcaggccaggagaagcagagagacgctgagcaccgggacaggaca
aagaagaagaagcggagccgagatcgagacagagacagagagcgggacagagacagagat
agagaccataagcggagacaccggtcccgttctcgatcacattccaggacccgggagagg
aataaagggaagtctagatatcggtccaggagtagaagtcagagtccccccaaagaccgc
aaggaccgggacaaatatggggagaggagtctggacagatggcgggataagcatgtggac
cgccctccccctgaggagcccgccatcggggacatttacaatggcaaagttaccagcatc
atgcagttcgggtgctttgtgcagctggaaggactaaggaagcggtgggaagggctggtg
cacatttctgagctccggcgagaaggccgagtagccaatgtggcggatgtggtgagcaaa
ggccaaagggttaaggtcaaagtgctgtccttcaccgggaccaagactagcctgagcatg
aaggatgtagaccaagagactggagaagatctgaacccaaaccgacgacgaaatcttgtt
ggggagaccaatgaggagacctcaatgcggaatcctgacagacccactcacctgtccctc
gtcagtgcccctgaagtagaggatgactcgctagagcgcaagcgcctcacccgcatctct
gacccagagaagtgggagatcaaacagatgattgctgccaatgtcctttccaaagaagag
tttccagactttgatgaagagacaggcattctccctaaggtggatgatgaagaagatgag
gaccttgagatcgaactggttgaggaagagcctccattcctaagagggcacaccaagcag
agtatggacatgagccctattaaaatcgtcaagaacccagatggctccctctcccaagca
gccatgatgcagagtgccttggctaaagaaaggcgggaactcaagcaggcccagcgggaa
gctgagatggattctattcccatgggactcaacaaacactgggttgatcctttgcctgat
gcggaaggcaggcagattgctgccaacatgaggggtattgggatgatgcccaatgacatt
cctgagtggaagaaacatgcctttgggggcaacaaagcgtcttacgggaaaaaaacccag
atgtcaatcattgagcagagggagagcctgcccatctacaaacttaaggaacagctggtc
caggctgtccatgacaatcagatcctgattgttattggagagacaggatctgggaagaca
acgcagatcacccagtacctagcggaggcaggctacacgtccaggggcaagatcggatgt
acccagcccagaagagtggcagccatgtcagtggccaaaagagtgtcagaggagtttggt
tgttgcttaggccaagaggtgggctacactatccgatttgaggactgcaccagccccgaa
acagtcatcaagtacatgacggacgggatgctgctcagagagtgcctgattgaccccgac
ctcactcagtatgcgatcatcatgttggacgaggcacacgagagaaccattcacactgac
gtgctctttggattgttgaaaaagacggttcagaaacggcaggacatgaagctgattgtc
acctcagccaccttggatgcagtgaagttttctcagtacttctatgaagctcccattttc
accatcccgggccgaacttacccagtagaaatactgtacacaaaggaacccgagacagat
tatctggatgccagcttgatcactgtcatgcagatccacttaacagagccaccaggtgat
atcctggtcttcttgacgggtcaggaggagattgatactgcttgtgagatcctgtatgag
cgaatgaaatccctgggacctgatgttcccgagttaattatcctcccggtgtactccgcc
cttcccagtgagatgcagacccgaatctttgaccctgctccacctggcagcagaaaggtc
gtgattgccaccaacattgcagagacatcactgactatcgatggcatctactacgtggtg
gaccctggattcgtgaagcagaaagtgtacaactctaagacagggatcgaccagcttgtg
gtgacgcctatttctcaggctcaggcaaagcaacgagctggcagagctgggagaacaggc
ccagggaagtgctacaggctgtacacggaacgggcctacagagacgaaatgctgaccacc
aacgtgccagagatccagagaaccaacttagcaagcacggtgctctctctcaaggccatg
ggcatcaatgacctgctgtccttcgacttcatggatgccccgccaatggaaaccttgatc
acagccatggagcagttgtacacactgggggctctagacgacgagggcctgctcactcgc
ctaggccgcaggatggcagagttccctctggagccaatgctgtgcaaaatgctgatcatg
tcagtgcatctgggatgcagtgaggagatgctgaccatcgtgtccatgctgtctgtgcag
aatgtcttctacaggccgaaggataaacaagccctcgcagaccagaagaaggccaaattc
caccagaccgaaggggaccacctgaccctgctggctgtgtacaactcctggaagaacaac
aagttctccaacccctggtgctacgagaacttcatccaggctcgctccctgcgccgggcc
caggatatccgcaagcagatgctaggcataatggatagacacaagctggatgtagtctcc
tgtggtaagtccacagtccgagtacagaaggccatctgcagtggattcttccggaatgct
gccaagaaagacccgcaggagggttaccggacactgattgaccagcaggtggtctatatc
catccttccagtgcactcttcaacagacagccggaatgggtggtgtaccacgagctggtg
ctgaccacaaaggagtacatgcgtgaggtcactaccatcgatccccggtggcttgtggag
ttcgccccagccttcttcaaggtctctgacccgaccaaactaagcaagcagaagaagcag
cagcgccttgagcccctgtacaaccgctatgaggagcccaatgcctggcgaatatcccgg
gccttccggcggcgctga |