KEGG   Loxodonta africana (African savanna elephant): 100674743
Entry
100674743         CDS       T04351                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2 isoform X1
  KO
K10755  replication factor C subunit 2/4
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03030  DNA replication
lav03410  Base excision repair
lav03420  Nucleotide excision repair
lav03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100674743 (RFC2)
   03410 Base excision repair
    100674743 (RFC2)
   03420 Nucleotide excision repair
    100674743 (RFC2)
   03430 Mismatch repair
    100674743 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lav03032]
    100674743 (RFC2)
   03036 Chromosome and associated proteins [BR:lav03036]
    100674743 (RFC2)
   03400 DNA repair and recombination proteins [BR:lav03400]
    100674743 (RFC2)
DNA replication proteins [BR:lav03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100674743 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    100674743 (RFC2)
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100674743 (RFC2)
DNA repair and recombination proteins [BR:lav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100674743 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    100674743 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_16 AAA_14 Viral_helicase1 Mg_chelatase Rad17 AAA_11 AAA_24 AAA_assoc_2 RuvB_N AAA_19 DNAX_ATPase_lid nSTAND3 AAA_18 MipZ AAA_5 AAA_28 ABC_tran AAA_25 AAA_30 AAA_23 NTPase_1 MeaB RNA_helicase SLFN-g3_helicase DUF815 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 100674743
NCBI-ProteinID: XP_003416692
UniProt: G3T5W7
LinkDB
Position
Unknown
AA seq 352 aa
MEAPEGGGGAAELGAQGPSPAPGKASGGAGHYELPWVEKYRPVKLNEIVGNEDTVSRLQV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPRGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLTDAQILARLMDVIEKEKVQCTDDGLEAIIFTAQGDMRQALNNLQSTFSG
FGFINSENVFKVCDEPHPLLVKEMIQRCVNADIDEAYKILAHLWHLGYSSEDIIGNIFRV
CKTFQMAEYLKLEFIKEIGYTHMKIVEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggaggcgccggaaggcggcggtggcgcggccgagctcggcgcccagggcccttcccct
gcgcccggcaaggcctccggcggcgccggccactacgagctgccgtgggttgaaaagtat
agaccagtaaagctgaatgaaattgtcggaaatgaagacactgtgagcaggctgcaggtc
tttgcaagagaagggaatgtgcccaacattataattgctgggcccccaggaactgggaaa
actacaagcatcctgtgtttggcacgagccttgctgggcccggcacttaaagatgccgtc
ctggaactcaatgcttccaatgacaggggcattgacgttgtgaggaataaaatcaaaatg
tttgcccagcagaaggtcacccttcccagaggtcggcataagatcatcatcctggatgaa
gcagacagcatgactgatggtgcccagcaagccttgcggagaaccatggaaatctactcc
aaaacaacgcgctttgctcttgcatgtaatgcttcggataaaatcatagagcccattcag
tcccggtgtgcagtgctccgctacacaaagctgacagatgcacagatcctggcgaggcta
atggatgttattgagaaggagaaagtgcagtgcactgacgacggcctggaagccatcatc
ttcactgcccagggggacatgaggcaggcgttgaacaacttgcagtccactttctcggga
tttggctttatcaacagtgagaatgtgttcaaggtctgcgacgagccccaccccttgctg
gtgaaggagatgatccagcggtgtgtgaatgccgacatcgacgaagcctacaagattctt
gctcacctgtggcatctcggctattcatcagaagacatcattggtaacatttttcgagtg
tgtaaaaccttccaaatggcagaatacttgaaactggagtttattaaggaaattgggtac
actcacatgaaaatcgtagaaggtgtgaactccctcctgcagatggcagggctcctggcc
aggctgtgtcagaagaccatggccccagtggccagttag

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