Loxodonta africana (African savanna elephant): 100674811
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Entry
100674811 CDS
T04351
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100674811 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lav04121
]
100674811 (TRIM54)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100674811 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
CoiA_N
Sina_RING
PHP
DUF349
Mod_r
DD_DDX21-DDX50
DUF1421
FlgN
Motif
Other DBs
NCBI-GeneID:
100674811
NCBI-ProteinID:
XP_023406356
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MNFAVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
AKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASGEEEDEEVVLDAEEGSAGPEEERPDSE
CGPTRMGAGTGRHAPVRSSHDGAPCGARSLLEQPFMLGAIRSLEPESGAPSAHACTLSFP
PAIPLGLWETKVGEKPRLGGEGSELLFGVPSFLWSILPPSCFSQAQASTDPTPIREPALP
GPGTRVPEICAETSGPPSSAPRQGKGAQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccggtggtgatcctg
ccctgccaacacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctcaaaccct
ctatggcaatcccggggctccaccactgtgtcttcaggaggccgttttcgctgcccgtct
tgcaggcatgaggttgtccttgaccgacacggtgtctatggcctgcagcgaaaccttcta
gttgagaacattatcgacatttacaagcaggagtcatccaggccactgcactccaaagct
gagcagcacctcatgtgtgaggagcatgaagatgagaagatcaatatctactgcctgagc
tgtgaagtgcccacctgctcactctgcaaggtctttggtgcccacaaggactgtgaggtg
gccccactgcccaccatttataaacgccagaagagtgagctcagcgatggcatcgccatg
ctggtggcaggcaatgaccgtgtgcaagcagtaatcacgcagatggaggaggtgtgccag
accattgaggacaacagccgaaggcagaagcagttgctaaaccagaggtttgagaccctg
tgtgcggtgctggaggagcgcaagggcgagttgctgcaggcgctggcccgcgagcaggag
gcgaagctgcagcgtgtccgcggcctcatccgccagtatggagaccacctggaggcttcc
tctaagctcgtggagtccgccatccagtccatggaggagccgcagatggcgctctacctc
cagcaggccaaggagctgatcaataaggttgggacaatgtcgaaggtagagctggcagga
cggccggagccgggctatgagagcatggagcaattcaccgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccaaccaggcgcttcgggggaggaagaagatgaggag
gtggtgttggacgcggaagaaggcagcgcggggccagaggaagagcggccggacagtgag
tgtggcccgacccgcatgggggcgggaactggcaggcacgctcctgtccgctcctcccat
gatggcgctccctgcggcgccaggagcctcttggagcaaccgttcatgttaggtgccatc
cggtccctcgaacctgagagtggtgcacccagcgcgcatgcatgtacactttctttcccg
cccgccattcctttggggctttgggagaccaaagtcggggagaaacccaggttgggaggg
gaagggagtgaactgcttttcggggttccctcgttcctttggagcatcctgccaccaagc
tgcttttcccaggcacaggcctccactgatccgacccctattcgggagcccgcgctccct
gggcctggcactcgggtaccagagatctgcgcagagaccagcgggccacccagctcggcg
ccccgccaggggaagggggctcaataa
DBGET
integrated database retrieval system
