Loxodonta africana (African savanna elephant): 100674954
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Entry
100674954 CDS
T04351
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100674954 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100674954 (MYO5C)
04131 Membrane trafficking [BR:
lav04131
]
100674954 (MYO5C)
03029 Mitochondrial biogenesis [BR:
lav03029
]
100674954 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lav04812
]
100674954 (MYO5C)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100674954 (MYO5C)
mRNA cycle factors
P-body specific factors
100674954 (MYO5C)
Membrane trafficking [BR:
lav04131
]
Others
Actin-binding proteins
Myosins
100674954 (MYO5C)
Mitochondrial biogenesis [BR:
lav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100674954 (MYO5C)
Cytoskeleton proteins [BR:
lav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100674954 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
AAA_16
AAA_22
NPHP3_N
XLF_CC
Motif
Other DBs
NCBI-GeneID:
100674954
NCBI-ProteinID:
XP_023395270
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MASTQIFTAKGSWGPSHPWALREISLSSVGQYNRVWIPDPEEVWRSAEIAKDYRVGDKAL
RLQLENGTELDYPIDPESLPPLRNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIY
TYSGIILVAMNPYKQLPIYGDAIIHAYSGQNVGDMDPHIFAVAEEAYKQMARNNKNQSII
VSGESGAGKTVSARYAMRYFATVSKSSSNAHLEDKVLASNPITEAIGNAKTTRNDNSSRF
GKYTEISFDERNQIIGANMRTYLLEKSRVVFQSENERNYHIFYQLCASAKQPEFKHLKLG
SAEEFNYTRMGGSTVIEGVNDRADMAETQKTFALLGFKENFQMDIFKVLAAILHLGNVQI
TAVGHERSSVNEDDCHLKVFCELLDLEMGKVAQWLCNRKIVTTPETVVKPMTRSQAVNAR
DALAKKIYTHLFDFIVEKINQALQFSGKKHTFIGVLDIYGFETFDVNSFEQFCINYANEK
LQQQFNLHVFKLEQEEYMKEGIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLLPHGTD
ENWLQKLYNNFVSKNTLFEKPRMSSTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEIL
RTSKFHLCANFFKENPVPSSLFGSTITVKSAKQVIKPNSKHFRTTVGTKFRSSLNLLMET
LNVTTPHYVRCIKPNDEKLSFDFNSKRIVQQLRACGILETIRIGAQSYPSRWTYIEFYSR
YGILMTKQELSFSDKKEVCKVVLHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQ
GCVVIQKHIRGWLQRKKFLRERQAALIIQQYFRGQQTVRKAITATALKEAWAAIIIQKYC
RGYLVRNLYQLIRMAIIAIQAYTRGFLARKQYQKMLEEHKAVILQKHARAWLARRRFQNI
RRFVLNIQLTYRVQCLQKKLEDQNKESHGLVEKLTSLAALRASDMEKIQKLELELERAAT
HRQNYEEKGKRYKDTVEEKLAKLQKHNSELEIQKQRIQLKLQEETEELKEKMDNLTKQLF
DDVQKEERQRILLEKSFELKTQDYEKQIWSLKGEIQALKDEKMQLHHQLEEERVTSSGLK
GEVAQLSKQTKIVSELEKEIELLQTQKIDVEKHVQSQKREMREKMSEITKQLLESYDIEG
VRSRLSVEDLGHLNEDGELWFAYEGLKKATRVLESHFQSQKDCYEKEIEALNFKVMHLSQ
EINHLQKFFREENDINESIRHEVTRLTSENMMIPGFKQQIAELEKQKQDLEIRLNEQTEK
TRGKLEELSHQLNRSCEEAGTQRRIIEVQSEIHTKEKEKFIGKIQEMEEVTEQLKKQFET
ESEVKSSFLQEVSRLTVENRNLEEELDMKDRVIKKLQDQVKTLTKTTEKTNDVHLSPGPK
EYLGMLEYKREDEAKLIQNLILDLKPRGVVVNMIPGLPAHILFMCVRYADSLNDADMLKS
LMNSTINGIKQVVKEHLEDFEMLSFWLSNTCHFLNCLKQYSGEEEFMKHNSPCQNKNCLR
NFDLSEYRQILSDVAIRIYHQFIIIMENNIQPIIVPGMLEYESLQGISGLKPTGFWKRSS
SIDDTDAYTMTSVLQQLSYFYSTMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMC
SCRKGMQIRCNISYLEEWLKDKNLQNSLAKETLEPLSQAAWLLQVKKTTDRDAKEIYERC
TSLSVVQIIKILNSYTPIDDFEKRVTPSFVRKVQALLNSREDSSQLMLDTKYLFQVTFPF
TPSLHALEMIQIPSSFKLGFLNRL
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggccagcactcagatcttcactgcaaagggctcatggggtccttcccacccctgggcc
ctcagggagataagcctgtcttctgttggtcagtacaacagggtttggattccggatcct
gaagaagtttggagatctgccgaaatagccaaggactacagagttggtgataaagccctg
aggctgcagctggagaatggcacggagctggattatcccattgatccagaatctctgcca
ccacttcggaatcctgacatcctcgtgggtgagaatgacctcactgcacttagttatctc
catgagcccgcggtgctccacaacctcaggatccgctttgcagagtccaaactcatttac
acctatagtggaatcattttggtggccatgaatccttacaagcagctgcccatatatgga
gatgccatcatccatgcttacagtgggcagaacgtgggcgatatggacccgcacatattt
gccgtggctgaagaggcatacaagcagatggccagaaacaataaaaatcagtcaataatt
gtaagtggggagtcgggtgctgggaagacggtgtcagcacgctatgccatgaggtacttt
gccactgtcagcaagtcaagcagtaacgctcatctggaggacaaagttctggcatccaat
cccataactgaggctattggaaatgccaagaccacccgcaatgacaacagcagtcggttt
gggaaatacacagaaatcagttttgatgaaaggaatcagattataggagccaacatgaga
acttacctgctggagaaatccagagttgtctttcaatcagaaaatgaacgcaattaccac
attttctatcagctttgtgcatctgcgaagcagccagaatttaaacatcttaagctgggg
agtgcagaagaatttaattatacaagaatgggaggcagtactgtcattgagggtgtgaat
gacagagctgacatggctgagacccagaagacctttgcgttgctgggtttcaaggagaat
tttcagatggatatttttaaggtcctggcagccatcctacacctgggcaatgtgcagatc
acagcagtgggccacgagaggtcctcagtcaatgaggacgactgtcacctgaaggtgttc
tgtgagctcctggacctggagatgggcaaagtggctcagtggctgtgcaatcgcaagatt
gtcaccacccctgagacggtggtgaaacccatgaccaggtcccaggctgtcaacgccagg
gacgcgctggccaaaaagatctacacccacctgttcgacttcattgtggagaagattaac
caagcattgcagttttcaggcaagaagcacacttttattggtgttttggacatttatggt
tttgaaacctttgatgtgaacagctttgaacagttttgcatcaattatgctaatgaaaaa
ttgcaacagcagtttaacctgcacgtctttaaacttgaacaagaagagtatatgaaggaa
ggtatcccttggacgctgatagatttttatgacaaccaaccagttattgacctgattgaa
gcaaaaatgggcattttggacttactggatgaagaatgcttgctcccacatggaactgac
gaaaactggcttcaaaagctgtataataattttgtcagcaaaaacaccttgtttgaaaaa
cccagaatgtccagtacatctttcatcatccagcactttgctgataaggtagagtataaa
tgtgaaggtttccttgagaagaacagagacaccgtctatgacatgctggttgaaatactg
agaacaagcaagtttcacctctgtgccaatttttttaaagaaaatccagttccgtcttcc
ctgtttggttcaacgatcacagttaaatctgcaaaacaagtcatcaagccaaacagcaag
catttccggaccacagttgggaccaagttccgcagctctctgaacttacttatggagacc
ctcaatgtgaccacaccccactacgtccggtgcatcaagccaaacgatgagaaattatcc
tttgactttaactccaaaagaattgttcagcagctgcgagcctgtggtattctggagacg
attcgcattggtgcccagagctacccttccaggtggacatacattgagttctatagtcgc
tatggtatcctcatgaccaagcaggagctttccttcagtgataaaaaagaggtgtgcaaa
gtggttttacacaggctcatccaggattccaatcagtaccagtttggtaaaaccaaaatt
ttcttcagagcaggacaagtggcttacttagagaaactccgattggataaactgaggcag
ggttgtgttgtgatacaaaagcatatccgtggctggctccagaggaaaaagttccttcga
gagagacaagctgccctaataatccagcagtacttccggggtcagcaaactgtgaggaaa
gctattactgcaacggccttaaaagaagcgtgggcagccatcatcattcagaagtactgt
cgtggatatcttgttcgcaatttgtaccagcttattcgtatggccatcattgcgatccag
gcctacacccggggattcctggcaaggaagcaatatcaaaagatgcttgaggaacataag
gctgtgatccttcagaaacatgcccgggcatggctggccagacgcagattccagaatatc
cggagatttgtgctaaacattcagcttacttatagggtccagtgtttgcagaaaaagttg
gaagatcagaacaaagagagccatgggttggtagagaagctgaccagcctggctgctctt
cgggccagtgacatggagaagattcagaaactggaactggaactggaaagagcagccacc
cacaggcaaaactatgaggagaaggggaagagatacaaggacactgtggaagagaaattg
gcaaagcttcagaagcataattcagaactggaaatacaaaaacagcgaatacaattgaag
cttcaagaggagactgaagagttgaaagagaaaatggacaacctcaccaagcagctcttt
gatgatgtgcaaaaagaagaacgacaaagaatacttcttgaaaaaagttttgaactgaaa
actcaagactatgagaagcagatttggtctttgaaaggagaaattcaagctctcaaggac
gagaagatgcaactccaccatcaactggaggaagagcgcgtcacctctagtggcttgaag
ggggaagtggcccaactgagcaagcagacaaagatagtctctgagctcgaaaaggagata
gagctacttcagacacagaagatagatgtggaaaaacatgtgcagtcacagaaacgggaa
atgagagaaaagatgtcagagatcacaaaacaacttcttgaaagctatgatattgaaggc
gtaagaagcaggctctctgtggaggatttgggacatttaaatgaagatggagaactttgg
tttgcttatgaaggcctaaagaaagcaacccgtgttttggagagtcatttccagtcccag
aaggattgctatgaaaaggaaattgaagctttgaatttcaaagtgatgcatctaagtcaa
gaaatcaaccacctgcaaaaattctttagagaagagaatgacatcaatgaaagtatccgt
catgaagttaccaggctaacatcagaaaacatgatgattccaggctttaaacagcaaatt
gcagaactggagaaacagaagcaagatcttgaaatccgcctgaatgaacaaactgaaaaa
acaagaggaaaactggaggaattgtctcatcagttgaatcgcagttgtgaagaggcaggg
acacagagaagaatcatagaggtccaaagtgaaatacacaccaaagagaaagagaagttc
atcggtaagattcaagaaatggaggaggtcaccgaacaattaaagaaacagtttgaaact
gagagcgaagtcaaaagtagtttcctgcaggaagtatcccgcctcaccgtggaaaacaga
aatcttgaagaagagttagacatgaaggacagagtgattaaaaagctacaagatcaagtc
aagactctaaccaagacaactgaaaaaaccaatgatgtgcacttgtcccctggacccaaa
gagtaccttggaatgctggaatacaagagggaagatgaggccaagctcattcaaaacctc
attctcgacttgaagcctcgcggtgtggtggtgaacatgatccctgggctgccagctcac
atcctgttcatgtgtgtacgctacgcagactccctgaatgacgccgatatgctaaagtcc
ctcatgaacagcaccattaatggcatcaagcaagtggttaaggaacatctagaagacttt
gagatgctgtccttttggctctccaatacttgtcattttctcaattgtctgaagcaatac
agtggggaagaggaattcatgaagcataacagtccatgtcagaataagaactgcttgaga
aattttgacctgtcagaatacagacaaattcttagtgatgtggctatacgaatatatcac
cagttcattattataatggaaaataacattcaaccaataatagtgccaggcatgctggaa
tatgagagtctgcagggcatttctggcctgaagcccacaggcttctggaagcggtcatcc
agcatagatgacacagatgcctacacaatgacctctgtcctgcagcagctaagctacttc
tacagcaccatgtgccagaatggcctagaccccgagctcgtgaggcaggctgtgaagcag
ctcttcttcttgattggggcagtgaccctgaacagcctcttcctacgcaaggacatgtgt
tcctgcagaaaagggatgcagataaggtgcaatatcagctacttagaagaatggcttaaa
gataagaatttgcagaacagcttagccaaggaaactttggaacctctctcccaggcagcc
tggctgcttcaggtcaagaaaaccacagacagagacgccaaggagatctacgaacgctgt
acctcactgtctgttgtgcagatcataaagatccttaattcatacacacctatagacgac
tttgagaaaagggtgactccatccttcgttcgcaaagtacaggctctcctaaatagtcga
gaggattcatcgcagctgatgttggataccaaatatctttttcaagtcacatttcctttt
accccctccctacatgctctagaaatgatccagatccccagcagtttcaagctgggtttt
ctcaatagattatag
DBGET
integrated database retrieval system
