Loxodonta africana (African savanna elephant): 100675008
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Entry
100675008 CDS
T04351
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lav03016
]
100675008 (TARBP1)
03036 Chromosome and associated proteins [BR:
lav03036
]
100675008 (TARBP1)
Enzymes [BR:
lav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
100675008 (TARBP1)
Transfer RNA biogenesis [BR:
lav03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100675008 (TARBP1)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100675008 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
100675008
NCBI-ProteinID:
XP_023404919
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MGLKLNHLCIVNGKLNDSEILKNLGYVRSGNFKLHQLMVFNVCQALSGGAVSSPLTKGQT
SMIRSPLRENKEARGGGGDAGARPAAVLQEAAREAAVGYLVPLLREPGPESPRLRRRVLR
AAAGALHSCVRLAGGPQWVAALAEEALRDLRAVRPDSGHEGASGGAACVPDGPGAEAAVE
VLVAVSPCLRPREDSALLERVVQAAVAVALSDAEAGPPEEAAAALAAGRLLPALGRCGEA
ALRAVWEGLRAAAARAGASGPGAGLAGVGRQLLVLSALAEKLLPEPGAGGAPRGPEVGLD
ARRCWHFWRTVQAGLAQAEDALTRKRARYVLRRAVEVSAELGEDCACSPREGNDPSVFWW
NEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNNLFDYAVSEEKGFWLFHPSWHM
CIYKRMFESENKVLTKEGVTHFLELYETRVLPFSPEFSEFIIGPLMDALSESSLYSRSPG
QLMGSGSPLGLKLQKFLVTYISLLPEEIKNGFLLQLIQKMTSRHWCAVPILFLSMALANV
PRCKALGVEGLLALRDVLQCTMITHQILLRGAAQCYLLQTAMNLVDVEKVSFSDVSTFLM
SLRQEESLGRGTSLWRELCDWLRVNESCFRQSSNCSSIELHETSPLNAYVKNLVQEYIKS
PAWERENSFMPDWFEAKLVAMMVLLAVDVEEMRNQYSEKRRIQNVLRIFLDPLLDALMKF
GTNAYIPLLKTDRCLQLLLKLLHTCLLKGSSTQDDEVFTLLQNFLMSTTESISEFILRRL
TMNELSSVSDLDRCHLYLMVLTELINVNLKVGWNRGNPIWRVISPLKNASIQHLQEMSSG
QEPALGRQIQKVVSMASLAVVCEAIDQKPELQLDSLDAGPMERFLSSLQLNQTLQKPHTE
EQSSFFEESSSQGWGKIVAQYVHDQWVCLSFLLKKYHTVIPTTESEILEPFLPAVQMPVR
TLQSALEALTILPSDQVLPVFQCMRILVPKLLTSYESLCMESFDMGWKIISSLSNTQLIF
WSNLKAFVQFVFDNKVLTIAAKINGQAYFKIKEIMYKIIEMSAIKTGVFNTLINYCCQSW
IVSASNVSQGSLSSAKNYSELVLEACIFGTVFRRDQRLIQDVQTFIENLGHQCAANVVIE
NTKREDHYVRICAVKFLCLLDGSNMSHKLFMEDLAIKLLEKDELVSKSRTRYYVNSLQHR
VKNRIWQTLLVLFPRFDQNFLSGIIDKIFQAGFINNQASIKYFIEWIIILILHKFPQFLP
KFWNCFSYGEEKFKTSICTFLSVLSHLDVIIEDISEKRLILKQALIIALQWCFSHNFSIR
LYALLALKKIWSLCKTLYVEEFDALTSVIESSLNQVENTHGAGNAKKNWQRIQEHFFFAT
FQPLKDYCLETIFYTLPRLSGLIEDEWIAIDKFAKFTDIPLDEGFQWYLSQTQLCELKPG
DWSQQDIDSTSGEADNKSEWTDVQKKIIPWKNNVPHLELELEFQDRAAKLGKSIGRLIVV
GSLIDKPTNLGGLCRTCEIFGASVFVVGNLHCISDKQFQHLSVSAEQWLPLVEVKPPQLI
DYLQQKKAEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGIPANLIQQLDVCVEIP
QQGIIRSLNVHVSGALLIWEYTRQQLPRR
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgggcttaaaattgaatcatttatgcattgtcaatggaaaactgaatgactccgaaatt
ttgaaaaatcttggctatgtcaggagtggtaacttcaaattacatcaactcatggtgttt
aatgtatgtcaagctctttcgggcggggctgtgtcttctccgttgactaagggacagacc
tctatgattagaagccccctcagagaaaacaaggaggcgcgtgggggcggcggggacgcg
ggtgcgcgccccgcggcggtgctgcaggaagcggcgcgcgaggcggcagtcgggtacctc
gtgcctctgctgcgggagcccggcccagagtcgccgcgcctccgccgccgtgtcctgagg
gcggccgccggggccctgcactcgtgtgtccgcctcgcggggggcccgcagtgggtggcc
gcgctggctgaggaggctctgcgcgacctgcgcgctgtgcggccggattccggccacgag
ggggcctccgggggcgctgcctgcgtacccgacgggccgggcgccgaggcggcggtggag
gtcctcgtggctgtcagcccctgcctgcggccgcgcgaagacagcgcgctgctagagcgg
gtggtgcaggctgccgtggccgtggcgctgagcgacgccgaggccgggccgcccgaggag
gcggcggcggcgctggcagcggggcggctgctgccggctctgggccggtgcggcgaggcg
gcgctgcgggccgtgtgggaggggctgcgcgctgcggccgcgcgggcaggggcctcgggt
ccgggcgccgggctagccggggtcgggcgccagctgttggtgctgagcgccctggctgag
aagctgctgcccgagccgggcgcgggcggagcccctcgcggcccagaagtgggtctcgac
gcccggcggtgctggcatttctggaggaccgtgcaggcgggcctggctcaggcggaggac
gcgctcacgcgcaagagggcgcgctatgtgctgcgaagggccgtggaggtgtcggcggag
ctgggggaagactgcgcgtgcagcccccgggaaggaaacgacccaagtgtgttttggtgg
aatgaaaagaaaaaagatgagcttctaaaattttgggaaaactatattttaattatggaa
acactagaaggaaaccagatacatgttataaagccagtcttaccaaagctaaataatctg
tttgattatgcagtgtcagaggagaaaggattttggctctttcacccatcctggcatatg
tgtatttataaaagaatgtttgaaagtgaaaataaagtcctgaccaaagaaggtgttacc
cattttttagagctctatgaaacaagggttcttccattttcaccagaattttctgagttt
attattggaccgctaatggatgcgctttcagagagctctctgtatagcaggtccccaggt
cagctgatgggcagtggttctccattgggattgaaattacagaagtttttagtcacttac
atttctctacttccagaagaaataaagaatggtttcctgttacagcttattcagaaaatg
acaagtagacactggtgtgctgttcccattttgtttctgtctatggctttggcaaatgtc
ccaagatgtaaagccctgggtgtagaagggcttcttgctctcagggatgttcttcagtgt
actatgatcacacatcagattctgttgagaggagcagctcagtgctatcttcttcagaca
gctatgaatttggtagatgtggagaaagtatctttttctgatgtctcaacttttcttatg
tctctgagacaagaggaatccttaggacgaggaacttcattgtggagagagctctgtgac
tggttgcgtgttaatgaaagctgtttcaggcagtcctcaaattgtagctccattgaactt
catgagacatctcctttgaatgcttatgtaaagaatctagttcaagagtatattaagtca
cctgcttgggaaagagaaaacagctttatgcctgattggtttgaagccaagcttgttgca
atgatggtcttgctggctgtggatgtggaagaaatgaggaatcaatatagtgaaaagcgg
agaatacagaatgtattaaggatattcttagatcctcttctggatgcccttatgaagttt
ggtacaaatgcctacatacccttgctgaaaactgacagatgcctccagttgctgttgaag
ttattgcatacttgcttgttgaaaggttccagtacccaagatgatgaagtgtttacactt
cttcagaattttctcatgtctactacagagagcatttctgaatttattctcagaagactt
actatgaatgagctaagcagtgtttcagatctggatcgttgccatttatacctgatggta
ttaactgagcttataaatgtcaatctgaaggttgggtggaacaggggtaaccccatttgg
agagtgatttctcctttgaaaaatgcatccattcagcaccttcaagagatgagcagtggg
caggaaccagcactgggtagacagatccagaaagtggttagtatggcttcattggccgtg
gtgtgtgaggccattgatcagaagccagagctgcagctagattcgctggatgctgggccc
atggagaggttcctgtcctctcttcagctcaatcagaccttacagaagccccacacagag
gagcagagcagtttttttgaagaatcatcttcccaaggatggggaaaaatagttgcacaa
tatgtccatgaccaatgggtctgcctctctttccttctgaaaaaataccacaccgttata
ccaaccacagagagtgagattctggaaccctttttacctgctgttcaaatgccagtaagg
actttgcagtctgcattagaagccctcacaattcttccttctgatcaagttttaccggtg
ttccagtgcatgagaattttggttcccaagctcctgacctcctatgagtcactctgcatg
gagtcttttgacatggggtggaaaatcatttcttctttaagcaacactcagctgatattc
tggtctaatttaaaagcctttgttcagtttgtttttgataataaagttcttaccattgct
gcaaaaatcaacggccaggcatatttcaaaataaaagagattatgtataagataattgaa
atgtctgctataaaaactggagtcttcaatacgctgataaattattgctgccaatcgtgg
atagtttctgcttcaaatgtgtcccaaggttctttatcaagtgccaaaaattatagtgaa
cttgtccttgaggcttgtatatttggaactgtgtttaggcgtgatcaaagacttattcag
gatgtacaaaccttcatagaaaatcttggacaccagtgtgcagcaaacgttgtcattgaa
aatactaaaagagaggaccattatgtgagaatttgtgctgtcaaattcctgtgcttacta
gatggctcaaacatgtcccataagttatttatggaagatcttgcaatcaagctcttagag
aaagatgaattggtgtccaagtcaagaactcgctactatgtgaattctctgcaacacaga
gtgaaaaaccgaatatggcagactctgcttgtacttttccccagatttgatcagaatttc
ttgagtggaattattgacaagattttccaggctggtttcatcaataatcaagcatccata
aaatatttcatagaatggattattatattgattcttcataaattccctcaatttcttcca
aagttctggaattgtttttcttatggtgaagaaaaatttaaaacaagcatttgtacattt
ttatcagttttgtcacatttggacgtcattattgaagatatttcagaaaagagactaatt
ctgaagcaagcccttattattgcactgcagtggtgtttcagtcacaatttcagtattcga
ctctatgctttacttgctcttaagaaaatctggagcttgtgtaaaacattatatgttgaa
gaatttgatgctttgacttctgtgatcgaatccagtcttaatcaagtggaaaacacgcat
ggagcagggaatgccaagaagaattggcagcgcattcaggagcatttcttttttgcaaca
tttcagccacttaaggattattgtctggagaccatattttacacccttccacgcctttca
ggccttattgaagatgaatggattgccattgataaatttgccaaattcactgacattcct
ttagatgaaggatttcagtggtacctttctcaaactcaactttgtgaactaaaaccaggt
gactggtctcagcaggacatagattctacctcaggtgaagcagataacaaatcagagtgg
actgacgttcagaagaagattatcccatggaagaataacgttccacatttagaactggag
ctcgagtttcaggatcgtgccgccaaacttgggaagtcaattggcagactgattgtagtg
ggctcactcattgataaaccaaccaacttaggaggattgtgccggacctgtgagatattc
ggggcgtcggtgtttgttgttggcaatcttcattgtatcagtgataaacagtttcagcac
ctcagtgtttcggcagaacagtggcttcctttagtggaggtaaaaccacctcagctaatt
gattatctgcagcagaaaaaagcagaaggttataccatcattggtgtggagcaaactgcc
aaaagtttagacctgactcagtactgctttcctgagaaatctctcctcttgttgggaaat
gaacgtgaaggaattccagcaaacctcatccagcagctggatgtctgtgtggaaatccct
cagcagggcatcatccgctcccttaacgtccacgtgagtggagcgctgctgatctgggag
tacacgaggcagcagctgccccggcgctga
DBGET
integrated database retrieval system
