KEGG   Loxodonta africana (African savanna elephant): 100675094
Entry
100675094         CDS       T04351                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X2
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
lav  Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:lav00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lav01009]
    100675094 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lav03036]
    100675094 (KDM5B)
Enzymes [BR:lav01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     100675094 (KDM5B)
Protein phosphatases and associated proteins [BR:lav01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100675094 (KDM5B)
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100675094 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD zf-C5HC2 PHD_2 zf-PHD-like PHD-1st_NSD
Other DBs
NCBI-GeneID: 100675094
NCBI-ProteinID: XP_010588516
LinkDB
Position
Unknown
AA seq 1251 aa
MRAEAMNIKIEPEETPEARTHNLRRRMGCPTSKCENEREMKSNVKQEPVEKKEYFVESEK
EKPKSRSKKTTSAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRC
PKCLAQECNKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRL
VSTIEEDVTVEYGADIASKEFGSGFPVRDGKLKLSPEEEEYLDSGWNLNNMPVMEQSVLA
HITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENV
MKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQG
FNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQK
DMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLL
VCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKK
KSLLSFKALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKS
QNQLTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDL
LDVSFEFDVELPQLAEMRIRLEQAHWLEEVQQACLDPNSLTLDDMRRLIDLGVGLAPYSA
VERAMARLQELLTVSEHWDDKAKSLLKARPRHSLSSLAAAVKEIEEIPAYLPNGVALKDS
VQRARDWLQDVEALQVLCPRCDIGPLGLKRKQRKLKEPLPSGKKRSSKLESLSDLERALT
ESKETASAMATLGEARLREMEALQSLRLANEGKLLSPVQDVEMKVCLCQKAPAAPMIQCE
LCRDAFHTSCVAVPYISQGPQVWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALR
YMIERTVNWQHRAQQLLSSGSLKFVQDRVGSGLLYSRWQASAGQMSETSKVSQPIGTTSF
SLPEDWDNRTSYLHSPFSTGRSCIPLHGISPEVNDLLMEAQLLQVSLPEIQELYQTLLAK
PSPAQQTDRSSPVRPSSEKNDCCRGKRDGINSLERKLKRRLEREDLSSERWDRFKKMRTP
KKKKIKLSHPKDMNSFKLERERSCELARSAETHSLPSDTSYSEQEDSEDEDAICPAVSCL
QPEGDEVDWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTVKDAPSRK
NT seq 3756 nt   +upstreamnt  +downstreamnt
atgcgagcagaggccatgaatattaaaattgaaccagaagagacaccagaagccagaact
cataatctgagacgtcgaatgggttgtccaacttcaaaatgtgaaaatgagagggaaatg
aagagcaacgtcaagcaagaacctgttgagaagaaagagtattttgtagaaagtgagaag
gaaaagcccaagagtcgatctaaaaaaaccaccagtgctgtggatctttatgtctgcctt
ctctgcggcagcggcagtgatgaggatcggcttctcttgtgtgatggctgtgatgacagt
taccacaccttttgcttgattccgcctctccatgatgttcccaagggagactggaggtgt
cctaagtgtttggctcaggagtgtaataaaccacaagaagcttttggctttgaacaagca
gccagagactataccctccgtacttttggggaaatggcagatgcgtttaaatctgattat
ttcaacatgccagtccatatggttcccacagagttggttgagaaagaattttggcgactg
gtaagcactattgaagaggatgtcacagtggaatatggagctgatatcgcctcaaaggaa
tttggcagtggctttcctgtgcgagatgggaaactcaaactttcaccagaggaagaggaa
tatcttgatagtggctggaatttgaacaatatgccggtgatggaacagtctgtccttgct
cacattactgctgatatttgtggcatgaaacttccttggttgtatgtgggaatgtgcttt
tcttcattctgctggcatattgaagatcactggagctattcaattaactatctgcactgg
ggtgagccaaaaacctggtatggagtcccagggtatgctgccgagcagttagaaaatgtc
atgaagaaactggctccagagctctttgtatcccagccggatctcctccatcagcttgtg
accatcatgaaccccaataccctgatgactcatgaagtgcctgtttaccgaactaatcaa
tgtgctggggaatttgtgattacatttccaagagcctaccacagtggttttaaccaaggt
tttaattttgctgaggctgttaacttctgcactgttgattggctgccgttaggccgacaa
tgtgtggagcattaccgcttgcttcaccgttactgtgtgttttcccacgatgagatgatt
tgtaagatggcttccaaggctgatgtgttagatgttgtcgtggcttcaactgtgcagaaa
gacatggccattatgattgaggacgagaaagctttaagggaaactgtccgtaaattggga
gtaattgattcagaaagaatggattttgagctattaccagacgatgagcgtcagtgtata
aaatgcaaaactacctgcttcatgtccgccatctcctgttcttgtaaacctggcctgctt
gtctgcctgcaccatgtaaaggagttgtgttcctgtcccccttataaatataagctgcgc
tataggtacactctggatgatctctaccccatgatgaatgcattgaagcttcgagcagaa
tcttacaatgaatgggccttgaatgtgaatgaggctttggaggcaaagatcaacaagaag
aaaagtcttctcagctttaaggctttaattgaagagtctgaaatgaagaaattcccagac
aatgatcttctgcgccacctgcggttggtcacgcaggacgcagagaagtgtgcctctgtt
gcacagcagttgcttaacggcaaaaggcaaactaggtaccgatctggtggggggaaatcc
caaaatcagttgacagtgaatgagctccgacagtttgtgacacagttgtatgctcttccg
tgtgtcctcagtcaaacaccattgctaaaggatctcttgaatcgtgtagaggacttccaa
cagcatagccagaaactgctctctgaggaaatgcctagtgccgccgagctgcaggacttg
ttagacgtcagctttgaatttgatgttgaacttccacagcttgcagagatgcgtatccgc
ctggagcaggcccattggctggaggaggtgcaacaagcttgcctagaccccaactccctc
actttggatgatatgagacgcctcatagacctaggggtagggctggctccatattcagca
gtggagagagctatggcccggctgcaagaactgctgacagtgtcggagcactgggatgac
aaagccaagagtctcctcaaggccagaccacggcattcattgagcagccttgctgcagca
gtaaaggagattgaggagatccccgcctatctgcccaacggtgtggctctgaaagactca
gtgcaaagagccagagactggcttcaggacgtagaagccctgcaggtgttgtgtcctcga
tgtgatattggccctttggggttgaagaggaagcagagaaagctaaaggagcccctgcca
agtgggaagaaaagaagcagcaaattagagagtctgagtgacctggagagagctttaact
gagagcaaagagactgcttcagctatggcaacgcttggggaagctcgtctaagggaaatg
gaagccttgcagtctctcagactagccaatgaagggaaattgctgtcacctgtccaagat
gtggagatgaaagtctgcctgtgtcagaaggccccagctgcccctatgattcaatgtgaa
ctctgcagggatgctttccacaccagctgtgtggcagtaccctatatttcacaaggcccc
caagtttggctttgtccccattgtcggaggtcagagaaaccgccactagagaaaattctg
cccctgttggcctccctgcagcgtatccgagttcgccttcctgagggagatgcacttcga
tatatgattgaaagaaccgtgaactggcaacacagagcccagcaactgctttcgtcaggg
agcctaaaatttgtgcaagatcgagtggggtcgggactgttgtatagcagatggcaagcc
tcagcaggtcagatgtcagaaacaagcaaggtatctcaacctattggcacaacatccttt
tccttgcctgaagactgggacaacagaacctcgtatttacactcccccttctcgactgga
cgaagttgcatccccctccatggcattagtccagaagtgaatgatctgttgatggaggcc
cagttgctccaggtatctcttcctgaaattcaggaactttaccagactttacttgcaaag
ccaagccctgctcagcagactgaccgaagctcaccagtcagacccagcagtgaaaagaat
gactgctgccgagggaagcgagatggaatcaatagtcttgagagaaaattgaagagacgc
ctggaaagagaggacctgtccagtgagcggtgggatcgatttaaaaaaatgcggaccccc
aaaaagaagaaaatcaaactgagccaccccaaggacatgaacagtttcaagttagagaga
gagcgtagctgtgagttagcccgttctgccgagactcattctctgccctcagacacatcc
tattccgaacaagaggactctgaggatgaagatgccatctgcccagctgtgagctgcctg
cagccagaaggagatgaggtggactgggtccagtgtgatggcagctgcaatcagtggttt
catcaggtctgtgttggtgtttctccagagatggcagagaaggaagactacatctgtgtg
cgctgtactgtgaaggacgcaccaagccgaaagtaa

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