Entry
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X2
KO
Organism
lav Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:lav00001 ]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:lav01009 ]
100675094 (KDM5B)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:lav03036 ]
100675094 (KDM5B)
Enzymes [BR:lav01000 ]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.67 [histone H3]-trimethyl-L-lysine4 demethylase
100675094 (KDM5B)
Protein phosphatases and associated proteins [BR:lav01009 ]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100675094 (KDM5B)
Chromosome and associated proteins [BR:lav03036 ]
Eukaryotic type
Histone modification proteins
Histone demethylases
100675094 (KDM5B)
BRITE hierarchy
SSDB
Ortholog Paralog GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa AA seq DB search
MRAEAMNIKIEPEETPEARTHNLRRRMGCPTSKCENEREMKSNVKQEPVEKKEYFVESEK
EKPKSRSKKTTSAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRC
PKCLAQECNKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRL
VSTIEEDVTVEYGADIASKEFGSGFPVRDGKLKLSPEEEEYLDSGWNLNNMPVMEQSVLA
HITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENV
MKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQG
FNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQK
DMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLL
VCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKK
KSLLSFKALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKS
QNQLTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDL
LDVSFEFDVELPQLAEMRIRLEQAHWLEEVQQACLDPNSLTLDDMRRLIDLGVGLAPYSA
VERAMARLQELLTVSEHWDDKAKSLLKARPRHSLSSLAAAVKEIEEIPAYLPNGVALKDS
VQRARDWLQDVEALQVLCPRCDIGPLGLKRKQRKLKEPLPSGKKRSSKLESLSDLERALT
ESKETASAMATLGEARLREMEALQSLRLANEGKLLSPVQDVEMKVCLCQKAPAAPMIQCE
LCRDAFHTSCVAVPYISQGPQVWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALR
YMIERTVNWQHRAQQLLSSGSLKFVQDRVGSGLLYSRWQASAGQMSETSKVSQPIGTTSF
SLPEDWDNRTSYLHSPFSTGRSCIPLHGISPEVNDLLMEAQLLQVSLPEIQELYQTLLAK
PSPAQQTDRSSPVRPSSEKNDCCRGKRDGINSLERKLKRRLEREDLSSERWDRFKKMRTP
KKKKIKLSHPKDMNSFKLERERSCELARSAETHSLPSDTSYSEQEDSEDEDAICPAVSCL
QPEGDEVDWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTVKDAPSRK
NT seq
3756 nt NT seq +upstream nt +downstream nt
atgcgagcagaggccatgaatattaaaattgaaccagaagagacaccagaagccagaact
cataatctgagacgtcgaatgggttgtccaacttcaaaatgtgaaaatgagagggaaatg
aagagcaacgtcaagcaagaacctgttgagaagaaagagtattttgtagaaagtgagaag
gaaaagcccaagagtcgatctaaaaaaaccaccagtgctgtggatctttatgtctgcctt
ctctgcggcagcggcagtgatgaggatcggcttctcttgtgtgatggctgtgatgacagt
taccacaccttttgcttgattccgcctctccatgatgttcccaagggagactggaggtgt
cctaagtgtttggctcaggagtgtaataaaccacaagaagcttttggctttgaacaagca
gccagagactataccctccgtacttttggggaaatggcagatgcgtttaaatctgattat
ttcaacatgccagtccatatggttcccacagagttggttgagaaagaattttggcgactg
gtaagcactattgaagaggatgtcacagtggaatatggagctgatatcgcctcaaaggaa
tttggcagtggctttcctgtgcgagatgggaaactcaaactttcaccagaggaagaggaa
tatcttgatagtggctggaatttgaacaatatgccggtgatggaacagtctgtccttgct
cacattactgctgatatttgtggcatgaaacttccttggttgtatgtgggaatgtgcttt
tcttcattctgctggcatattgaagatcactggagctattcaattaactatctgcactgg
ggtgagccaaaaacctggtatggagtcccagggtatgctgccgagcagttagaaaatgtc
atgaagaaactggctccagagctctttgtatcccagccggatctcctccatcagcttgtg
accatcatgaaccccaataccctgatgactcatgaagtgcctgtttaccgaactaatcaa
tgtgctggggaatttgtgattacatttccaagagcctaccacagtggttttaaccaaggt
tttaattttgctgaggctgttaacttctgcactgttgattggctgccgttaggccgacaa
tgtgtggagcattaccgcttgcttcaccgttactgtgtgttttcccacgatgagatgatt
tgtaagatggcttccaaggctgatgtgttagatgttgtcgtggcttcaactgtgcagaaa
gacatggccattatgattgaggacgagaaagctttaagggaaactgtccgtaaattggga
gtaattgattcagaaagaatggattttgagctattaccagacgatgagcgtcagtgtata
aaatgcaaaactacctgcttcatgtccgccatctcctgttcttgtaaacctggcctgctt
gtctgcctgcaccatgtaaaggagttgtgttcctgtcccccttataaatataagctgcgc
tataggtacactctggatgatctctaccccatgatgaatgcattgaagcttcgagcagaa
tcttacaatgaatgggccttgaatgtgaatgaggctttggaggcaaagatcaacaagaag
aaaagtcttctcagctttaaggctttaattgaagagtctgaaatgaagaaattcccagac
aatgatcttctgcgccacctgcggttggtcacgcaggacgcagagaagtgtgcctctgtt
gcacagcagttgcttaacggcaaaaggcaaactaggtaccgatctggtggggggaaatcc
caaaatcagttgacagtgaatgagctccgacagtttgtgacacagttgtatgctcttccg
tgtgtcctcagtcaaacaccattgctaaaggatctcttgaatcgtgtagaggacttccaa
cagcatagccagaaactgctctctgaggaaatgcctagtgccgccgagctgcaggacttg
ttagacgtcagctttgaatttgatgttgaacttccacagcttgcagagatgcgtatccgc
ctggagcaggcccattggctggaggaggtgcaacaagcttgcctagaccccaactccctc
actttggatgatatgagacgcctcatagacctaggggtagggctggctccatattcagca
gtggagagagctatggcccggctgcaagaactgctgacagtgtcggagcactgggatgac
aaagccaagagtctcctcaaggccagaccacggcattcattgagcagccttgctgcagca
gtaaaggagattgaggagatccccgcctatctgcccaacggtgtggctctgaaagactca
gtgcaaagagccagagactggcttcaggacgtagaagccctgcaggtgttgtgtcctcga
tgtgatattggccctttggggttgaagaggaagcagagaaagctaaaggagcccctgcca
agtgggaagaaaagaagcagcaaattagagagtctgagtgacctggagagagctttaact
gagagcaaagagactgcttcagctatggcaacgcttggggaagctcgtctaagggaaatg
gaagccttgcagtctctcagactagccaatgaagggaaattgctgtcacctgtccaagat
gtggagatgaaagtctgcctgtgtcagaaggccccagctgcccctatgattcaatgtgaa
ctctgcagggatgctttccacaccagctgtgtggcagtaccctatatttcacaaggcccc
caagtttggctttgtccccattgtcggaggtcagagaaaccgccactagagaaaattctg
cccctgttggcctccctgcagcgtatccgagttcgccttcctgagggagatgcacttcga
tatatgattgaaagaaccgtgaactggcaacacagagcccagcaactgctttcgtcaggg
agcctaaaatttgtgcaagatcgagtggggtcgggactgttgtatagcagatggcaagcc
tcagcaggtcagatgtcagaaacaagcaaggtatctcaacctattggcacaacatccttt
tccttgcctgaagactgggacaacagaacctcgtatttacactcccccttctcgactgga
cgaagttgcatccccctccatggcattagtccagaagtgaatgatctgttgatggaggcc
cagttgctccaggtatctcttcctgaaattcaggaactttaccagactttacttgcaaag
ccaagccctgctcagcagactgaccgaagctcaccagtcagacccagcagtgaaaagaat
gactgctgccgagggaagcgagatggaatcaatagtcttgagagaaaattgaagagacgc
ctggaaagagaggacctgtccagtgagcggtgggatcgatttaaaaaaatgcggaccccc
aaaaagaagaaaatcaaactgagccaccccaaggacatgaacagtttcaagttagagaga
gagcgtagctgtgagttagcccgttctgccgagactcattctctgccctcagacacatcc
tattccgaacaagaggactctgaggatgaagatgccatctgcccagctgtgagctgcctg
cagccagaaggagatgaggtggactgggtccagtgtgatggcagctgcaatcagtggttt
catcaggtctgtgttggtgtttctccagagatggcagagaaggaagactacatctgtgtg
cgctgtactgtgaaggacgcaccaagccgaaagtaa