Loxodonta africana (African savanna elephant): 100675249
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Entry
100675249 CDS
T04351
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X2
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100675249 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lav03036
]
100675249 (CHD8)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100675249 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
100675249
NCBI-ProteinID:
XP_003421657
UniProt:
G3T3K8
LinkDB
All DBs
Position
Unknown
AA seq
2581 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIVEALGLPSSLDPLDQMNQDGGGGDVGN
SSTSDLVPPPEETAPTEIPKESAVPAPESLTLHDYTTQPASQEQPAQPILQTTMPTSGLL
QVSKSQEILSQGNPFMGVSATAVSSSTGGQPPQSAPKIVILKAPPSSSVTGAHVAQIQAQ
GITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQATVQRIVQP
SRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQG
HRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSSQ
PQPQQPPSTQPVTLSSVQQAQIMGPGQSPGQRLSVPLKVVLQPQAGSSQGASSGLSVVKV
LSASEVAALSSPASSAPHTGAKTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIP
RVLNEDELPSVRPEEEGEKKRRKKGSGERLKEEKPKKNKTSGTSKTKGKSKLNTITPVVG
KKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEE
VDVTGPIKPEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSGQ
YTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP
DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSR
HPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLG
KTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQ
YEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLL
DSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKL
QAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNM
PNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKL
LPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE
GSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKA
DLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHAY
GRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENIK
GFIWDLISPAENGKTKELQNHSGLSIPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTLF
QDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFPVVDQLEVP
TTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRVLDNFSDI
VEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQQPGHLFWPP
GSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARREKQQRWTRR
EQTDFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLP
PAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLSLCQPPGPELP
KWWEPIRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNYQAGAPAPSLSRCS
TPLLHQQYTSRTASPLPLRLEAPVEKPPEETAAQVPSLESLTLKLEHEVVGRSRPTPQDY
EMRVTSSDTAPLVSRSVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESEDE
KEEKLTADPSRSKLYDEESLLSLTMSQDGFPNEDGEQMTPELLMLQERQRASEWPKDRVL
INRIDLVCQAVLSGKWPSSRRSQEMVTGGILGPGNHLLDSPSLTPGEYGDSPVPTPRSSS
AASMAEEEASAVSAAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMANGVMGDGH
PLFHKKKGNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVGEDAPRRAELEMW
LQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAEMNCLGVEPVQTANSRNGKKGHHAET
VFNRVLPGHIAPESSKKRSRRMRPDLSKMMALMQGGGTGSLSLHNTFQHSSSGLQSLSSL
GHSSATSASLPFMPFVMGDAASSPHVDSSTMLHHHHHLPHPHHHHHHHPGLRATGYPSSP
ATTTSGTALRLPPLQPAEDDEDEDEEDDDLSQGYDSSERDFSLIDDPMMPANSDSSEDAD
D
NT seq
7746 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatctgtttgatgacccaaatttatttggcctggactctctg
actgatgacagcttcaaccaggtcacacaagaccccattgtggaagcccttggactgcca
agctctctggaccccttggatcaaatgaaccaggatggtggaggtggtgatgtggggaat
tcatcaacaagtgacctggtccccccaccagaggaaacagcccctacagaaattcccaaa
gaatcagcagttccagctccagaatctttaaccttgcatgattataccactcagcccgcc
agccaggagcagccagcccaacctatcttacagacaacgatgccaacatcgggacttttg
caggtctccaagagccaggagatcctgagccaagggaatcctttcatgggtgtctctgcc
acagctgtctccagtagtactggagggcagccacctcagtcagcccctaagattgttatc
cttaaggccccaccaagctcctcagttactggtgctcatgtggcacaaattcaggcccaa
ggtatcaccagcacagctcagcccctggtggctggcacagccaatggtggaaaagtcact
tttaccaaagtgctaaccggcaccccccttcgaccaggtgtttccattgtctctggtaat
acagtgttggccgccaaggtccctgggaaccaggctactgttcagcgcattgtccagccc
agccgaccagtaaaacagctggtcctacagccagttaagggttcagctcctgctggaaac
cctggggccacagggcccccactgaagcctgcagttacactgacctctacacctacccag
ggtgaatcgaaacgcatcaccctggtcctccagcaaccacagtcgggaggtccccaagga
caccggcacgtcgtactaggaagtttaccaggcaagatagtgttacagggcaaccagctg
gcagccctgactcaagccaagaatgcccagggacagcctgccaaagtagtaactatccag
ctgcaggtgcagcagccacagcaaaaaattcagatcgtgccgcagcctccatcatctcag
ccacagccccagcagccaccctcaacccagccagtgactctctcatctgtgcagcaggct
cagataatgggaccaggacaaagtccaggacaaagactttcagtacctctcaaggtggtg
ctgcagccacaggccggctcttcccaaggtgcctcttcagggctctccgtagttaaagtt
ctaagtgccagtgaagtggcagcattgtcatcaccagcaagctctgctcctcatactggg
gccaagacaggaatggaggaaaaccgcaggctggagcaccagaagaagcaagagaaagca
aatcggattgtagcagaggccattgctagggcccgtgcccggggtgagcagaatatacct
cgtgtcctgaatgaggatgaattgcccagtgttcggccggaggaggaaggtgaaaagaaa
cgcaggaagaagggcagtggggagaggctcaaggaggaaaagccaaagaagaacaaaact
tctggtacctccaaaactaagggcaaaagtaagctgaacaccattactcctgtggtgggt
aagaagagaaagcgtaatacctcatctgataattcagatgtggaagtcatgcctgcacaa
tcgccccgggaagatgaagaaagtagcattcagaagagacgctccaatcgccaagtaaag
cgaaaaaaatatacagaggatctggatataaagatcacagatgatgaagaagaagaagag
gtggatgtaactggtccaataaaacctgagcctatcctcccagaaccagtgcaggaaccg
gatggcgagactctgccttccatgcagttctttgtagagaatcccagtgaagaagatgca
gccattgtagacaaagtgctttctatgagggttgtgaagaaggagcttccttcaggacag
tatactgaagcagaagaattctttgtcaagtacaagaactactcctacctacactgtgaa
tgggctactatctcccagctagagaaggataagaggatccatcaaaaactaaagcgcttc
aaaaccaaaatggctcagatgagacacttcttccatgaggatgaggagccctttaatcca
gactatgtagaagtggataggatattggacgagtctcacagtattgacaaggacaacggg
gagcctgtaatttactacctagtgaaatggtgctctttgccctatgaggatagtacatgg
gagctgaaagaagatgttgatgagggcaagattcgagaatttaaacggatccagtcaagg
cacccagaactcaaaagggtgaatcgtccacaggcaagtgcttggaagaagttggagctg
tcacatgagtataaaaacagaaaccagttacgggagtatcagttggaaggggtcaactgg
ttgctctttaattggtataacaggcagaactgcatcctggctgatgagatgggattgggc
aaaactattcagtccattgccttcttacaggaggtatataatgtgggcatccatggcccc
ttcctggtcattgccccattgtccacaattactaactgggaacgtgaattcaatacatgg
acagagatgaacactattgtgtaccatggcagtctggccagccggcagatgattcagcag
tatgaaatgtactgcaaagattcacgggggcgcctcatccctggcgcatacaaatttgat
gccctgatcaccacttttgagatgattttgtcagactgccctgagcttcgtgaaattgag
tggcgttgtgtcatcattgatgaggcccatcgacttaagaaccgtaattgcaagctgctt
gatagtctcaagcacatggacctggagcataaagtgctactcacaggaactccattgcaa
aatactgtggaggagctgtttagcttgcttcatttcctggaaccttcacagtttccctca
gaatcagagttcctcaaggactttggggatctgaagacagaggaacaggttcaaaagcta
caggccattctcaagccaatgatgctgagaagactcaaagaggacgttgaaaaaaacctg
gcacccaaacaagaaactattattgaagtagaactaacaaacatccagaagaaatactac
cgggctattttggaaaagaatttctccttcctttccaaaggggcaggtcataccaacatg
cctaatctactcaacacaatgatggagttgcgcaaatgctgcaaccacccgtatctcatc
aatggtgcagaagaaaaaatcttaacagaatttcgggaagcttgccatattatacctcat
gacttccacctgcaggccatggttcgttcagctggcaaattggtccttattgacaagtta
cttccaaagcttaaagctggtggccataaggttctgatcttctcccagatggtacgctgc
ctggatatcctagaggattatctaatccagaggaggtacttatatgagcgtattgatggg
cgagttagaggcaaccttcgacaggctgctattgatcgcttcagcaagcctgactcagac
cgctttgtcttcctgctatgcacccgggctgggggacttggtattaatctcacagctgct
gatacatgcatcatctttgattcggattggaatcctcaaaatgacctgcaggcccaggca
cggtgtcatcgaattgggcagagcaaagctgtaaaagtgtaccgtctcatcactcgtaat
tcctatgagagagagatgtttgataaggctagcctaaagttgggattggataaggctgtg
cttcaatccatgagtggtcgggatggcaacattactggaatccagcaattctccaagaag
gagattgaagatctcttaagaaaaggagcctatgcggccataatggaggaagatgatgaa
ggttccaagttttgtgaagaggacattgatcagatcttgttaagacgaactacaaccatc
accattgagtctgaaggaaaaggttctacctttgctaaggcaagctttgttgcttctgaa
aataggacagatatttctctggatgaccccaacttttggcagaagtgggccaaaaaggct
gacctagacatggatctactcaatagcaagaataacttggtgattgacacacctagagta
cgaaaacagacccgtcacttcagcactctgaaagatgatgacctggtggaattctctgat
ttggaaagtgaggatgatgagcggcctcgctcccgccgacatgaccgtcatcacgcttat
gggcgcactgactgctttcgggtggaaaagcaccttctggtatatggctggggacggtgg
cgagatatcttgtcccatggacgcttcaagcgacgtatgacggagcgagacgtggagacc
atttgccgtgctatccttgtgtactgccttctacactatcgtggggatgaaaatatcaaa
ggctttatttgggacttgattagccctgctgaaaatggcaagacgaaagaattgcagaat
cattcaggtctgtctatccctgtgccccgtggacgcaaagggaaaaaagtaaagtcacaa
agcacttttgatatccataaggcagactggattcggaaatataaccctgacactctgttc
caagatgagagttataagaagcacttgaaacatcagtgtaataaggtgctgttgcgagta
cgaatgctctactacctaaggcaggaggttattggagaccaggcagagaaggtgttaggg
ggcgccattgccagtgagattgacatatggttcccagtagtggatcagctggaggttcca
acaacatggtgggacagtgaggctgacaagtccctgctcattggagtttttaagcatggc
tatgagaaatacaataccatgagggcagacccagctttatgcttcctggaaaaggctggc
cgaccagatgacaaagccattgcagcagagcatcgagtgttggataatttctctgacata
gtagaaggggttgactttgataaggattgtgaagatcctgaatataaaccactccagggt
ccccccaaagaccaagatgatgagggtgatcctttgatgatgatggatgaggagatctca
gtgattgatggagatgaagcccaggtgacccaacagccaggccatctattctggcctcca
ggctctgccctgacagctaggcttcggcgactagtaacagcctatcagcgcagctataag
agggagcagatgaagatagaggctgcagaacgtggggaccggcggcggcggcgttgtgag
gcagcctttaagctaaaagaaattgcacgacgggagaaacagcaacgatggacaaggcgt
gaacaaactgatttctatcgagttgtttcaacctttggtgtggagtatgaccctgacact
atgcagtttcattgggatcgcttccgcacttttgcccgactggacaaaaaaacagacgaa
agccttaccaagtacttccatggcttcgtggccatgtgccgccaggtgtgccgtcttccc
cctgcagctggtgatgaacccccagaccctaatctgttcattgagcccatcactgaagag
agggcctcgcggactctctaccgtattgaattgcttcggcgcttacgggaacaagttttg
tgccatcctcttttggaagacaggctgtcattatgtcagcctccaggtcctgagttgccc
aaatggtgggagcctattcggcatgatggagaacttctacgaggggcagcccgccatggg
gtgagccaaacagactgcaacattatgcaggacccagacttctcttttctggctgcccgt
atgaattatatgcagaactatcaggcaggagcacccgctccatccctatcacgctgctct
actccactgctacaccagcagtatacctcgcgcactgcctcaccactgcccctgcgccta
gaggctcctgttgaaaagccacctgaggagacagctgcccaggtccccagtctggagagt
ctaaccttaaagctagagcatgaggtagtgggcaggagccgaccaaccccacaagactat
gagatgcgagtaacctcctctgatactgcacctctggtttctcggagtgttccaccagtc
aaactggaggacgaggacgattcagactctgagctggacttgagcaagctgtcaccgtca
tcctcttcttcctcatcctcatccagctccagctccagcactgatgagagtgaggacgag
aaggaagagaagctaactgctgacccatcccgctcaaagctctatgatgaagagagtctc
ctgtccctcactatgtcccaagatggattcccaaatgaagatggagaacaaatgaccccg
gagcttctgatgcttcaggaaagacaaagagcctctgagtggcccaaggatcgtgtcttg
ataaaccgtattgacctcgtctgccaggctgtactctcagggaagtggccttctagccgt
cggagccaggaaatggtaacaggaggaattctggggccaggcaaccacttgctagacagt
ccctcattgacccccggagaatatggtgactctccagtccccacgccacgaagcagcagt
gcagcttccatggcagaggaggaagcatctgcggtcagtgcagcagcagcccagttcacc
aaacttcgccgaggcatggatgagaaggagtttacagttcagatcaaagatgaggaagga
ttgaagttaacattccagaagcacaagctgatggctaatggagtaatgggagatggacat
ccactgttccacaagaagaaggggaacagaaagaagcttgtggagctggaggtggagtgc
atggaagagcctaatcaccttgatgtggacctggagacccggatccctgtcatcaataag
gtggatggtactttgctggtgggtgaggatgcccctcgccgggctgaactggagatgtgg
ttacagggtcatccagagtttgctgtcgatccccgatttctagcgtatatggaggatcgc
agaaaacagaagtggcagaggtgtaaaaaaaataataaagcagaaatgaactgtttggga
gtggaaccagtacagacagctaactctaggaatggaaaaaagggtcaccacgctgaaact
gtgttcaaccgcgttttgccagggcatattgcaccagagagcagcaagaagcggtcccgt
aggatgcgaccagacctttccaagatgatggccctgatgcagggtggaggcactgggtcc
ttatctctgcataacaccttccaacacagtagtagtggcctgcagtctctgtcatctctg
ggtcacagcagtgctacttctgcatctttgccttttatgccgtttgtgatgggcgatgca
gcatcatcccctcatgtagactccagcaccatgcttcatcaccaccaccacctccctcac
ccccaccatcaccaccatcatcatccaggcctgagagccactggttacccttcttcacca
gcgactaccacatctggcactgccttgcggttgccaccactgcaacctgcagaggacgat
gaggatgaggatgaggaagatgatgatttatctcagggctatgatagctcagaaagggac
ttctcactcattgatgatcctatgatgccagccaactcagactccagtgaagatgctgat
gattga
DBGET
integrated database retrieval system
