Loxodonta africana (African savanna elephant): 100675250
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Entry
100675250 CDS
T04351
Symbol
COL9A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04151
PI3K-Akt signaling pathway
lav04510
Focal adhesion
lav04512
ECM-receptor interaction
lav04820
Cytoskeleton in muscle cells
lav04974
Protein digestion and absorption
lav05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100675250 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100675250 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100675250 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100675250 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100675250 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100675250 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lav00535
]
100675250 (COL9A3)
Proteoglycans [BR:
lav00535
]
Extracellular matrix (ECM) proteoglycans
Others
100675250 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100675250
NCBI-ProteinID:
XP_010599475
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MAGAPMLALLLLGQLLAVTEMQKVGPRGPPGPPGPPGKPGKDGIDGETGPPGLPGPPGLK
GALGKAGKPGEAGLPGLPGVDGLTGREGPPGPKGAPGERVSAPGSPGWAGRGLPTGXGKA
GVSGLPGGVGLRGPPGPSGLPGPPGPPGPPGPPGQPGVLPEGTTNLQCPAICPPGPPGPP
GMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGIPGTVGLQGPRGLRGLPGPLGPPGDR
GDRGERGPEGFRGLKGDLGKPGPKGIPGLAGLAGEPGMPGKDGRDGMPGLDGEKGEAGRN
GSPGEKGPNGLPGLLGRAGSKGEKGELGKAGELGEAGPSGEPGIPGDVGIPGERGEAGHR
GSAGALGPQGPPGAPGVRGFQGQKGSIGDPGLPGPQGLRGSVGDRGPVGAAGPKGDQGIA
GADGLPGDKGELGPNGPVGAKGMSGDRGELGPKGIQGPNGTSGVQGVPGPPGPVGFQGLQ
GSPGITGKPGVPGKEASEQHIRELCGGIISEQIAQLATHLRKPLAPGSIGRPGPAGPPGP
PGLPGSTGHPGARGPPGYRGPTGELGDPGPRGDQGDRGDKGATGVGLDGPDGDQGLQGPQ
GVPGTSKDGQDGAHGEPGPPGDPGIPGAVGAQGTPGICDTSACQGAVLGGGGEKSGPKSS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcccccatgttggccctcctcctgctcgggcagctcctggctgtgactgag
atgcagaaagtgggacctcgaggcccccctggccccccagggcctcctggaaagccaggc
aaggacggcattgatggagaaactggtcctccaggtctgcctggacccccgggactgaaa
ggggccctggggaaagcagggaagccaggagaggccgggctgccggggctgcctggtgtg
gacggtctgactgggcgggaaggaccccccggccccaagggtgcccctggagaacgggta
agtgcccctgggtccccaggctgggctggaagaggtttgcctacaggctgaggaaaggca
ggagtgagcggcctcccaggtggagtcggcctccggggtcccccgggaccctctggactc
ccaggccccccaggccccccaggacctcctggacctcctggacagccaggggtcctccct
gaaggtactaccaacctgcagtgccctgccatctgcccgccaggaccccccggcccccca
ggaatgccgggattcaagggacccacgggctacaaaggggagcaaggagaagttggcaaa
gatggtgagaagggtgatcctggcccccctgggcccgctggcatcccaggcaccgtgggg
ctgcagggcccccgaggtcttcgaggactgccagggcctctcgggccccccggggaccgg
ggtgacagaggcgagaggggcccagaggggttccgtggactcaagggcgatctcggcaaa
cctggccccaaagggatccctggactggccgggctggccggagagccgggcatgccaggc
aaggatggccgggatggcatgccagggctcgatggagagaagggagaggccggccgaaat
ggcagccctggagagaagggacccaacgggctgccgggacttctggggcgagcagggtcc
aaaggcgagaagggagaactgggcaaagctggagagctgggagaggccggcccctcggga
gagccaggcatccctggagatgtggggataccgggggagcgcggtgaggccggccacagg
ggctccgcgggggctctaggcccacaaggccctcctggggcccccggtgtgcgaggcttc
cagggccagaagggtagcatcggggaccccggcctacctggcccccagggcctccgaggc
agcgtgggcgaccggggcccggtaggagccgcagggccaaagggagaccagggcattgcc
ggtgccgacggccttcctggggataaaggagagctgggtcccaacgggcctgtcggagcc
aaaggcatgtctggtgacagaggcgagctgggccccaaaggcatccagggtcccaatggc
accagcggtgttcagggggtcccaggcccgcctggccctgtgggcttccaggggctccaa
ggcagccctggaattacggggaaaccaggtgttccggggaaagaagccagcgagcagcac
attcgggagctgtgcgggggcatcatcagcgaacaaatcgcacagttagccactcacctg
aggaagcctttggcgccaggatccatagggcgacccggtccagccggcccaccgggcccc
ccggggctccctggctccactggccaccctggtgctcgagggccccctggatatcgcggt
cccactggagagctgggagaccctggaccccgaggagaccaaggtgacagaggcgacaag
ggcgccactggtgtcggcctggatgggcccgacggagatcaagggctccaaggtccgcaa
ggggtgcctggcactagcaaagacggtcaggacggtgctcacggtgaacctgggcctcct
ggcgatcctggcattcctggcgcggtgggtgctcaggggactcccgggatctgtgacacc
tcagcctgccaaggagctgtgttaggagggggcggggagaagtcgggccctaaaagctca
taa
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