Loxodonta africana (African savanna elephant): 100675414
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Entry
100675414 CDS
T04351
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100675414
Ion channels [BR:
lav04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100675414
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Motif
Other DBs
NCBI-GeneID:
100675414
NCBI-ProteinID:
XP_023394776
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All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MAPVKISHVVSFSSQDPKYPVANLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYI
DVGNCGCAFLQIDVGRSSWSLDRPFITLLPATMLMSLADSKQGKNLSGVRMFKDDDFLAP
ASGESWDRLRLTCSQPFTRHQSFGLAFLRVRSSLDSLDDPMTGPSALVSSGVSQESSDAQ
ESASSPWLANPSIRRTFFPDPQKSTKEISELKNVLKQLQPGTLGRSARMVLSAARRVQPA
SVADPRNNHTEQSHSHPDSSEPRPEEQNSENDMGRTKRRKVQDRRFLSNSRPDGRGTARQ
HQPQTQSNGQRRQHQPQTQSNGQRRQHQPQTQSNGQRRQHQLQTQSNDVQDSGQCPICAG
SFAIEILPLHAATCGETFPAHPASPCSSPSSSQSVVRFHCMTLTPAPLVPRPQPYWSEIM
NKKLKFPPPLLGAIQEGRLGFVQQLLESGLEGTGGSGPLRNVEESEDRSWREALNLTIRL
GHEAITDVLLANVKFDFRQIHEALLVAVDTNQPAVVRRLLARLDREKGRKVDTRSFSLAF
FDSSIDGSRFAPGVTPLTLACQKDLYEIAQLLMDQGHTIARPHPVSCACLECSNARRYDL
LKFSLSRINTYRGIASRAHLSLASEDAMLAAFQLSRELRRLARKEPEFKPEYIALESLSQ
DYGFELLGMCRNQSEVTAVLNDLGEDSKTEPEAEGLGQAFEEGIPNLARLRLAVNYNQKR
FVAHPICQQVLSSIWCGNLAGWRGSTTIWKLFVSFLIFLTMPFLCLGYWLAPKSQLGRLL
KIPVLKFLLHSASYLWFLIFLLGESLVMETQLSTFHGRSQSVWETSLHMIWVTGFLWFEC
KEVWIEGLRSYLLDWWNFLDMVILSLYLAAFALRLLLAGLAHMHCQEAPDGTACHYFTTT
ERSEWRTEDPQFLAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMIRFMFIL
MIILTAFLCGLNNIYVPYQETERLGNFNETFQFLFWTMFGMEEHSVVDMPQFLVPEFVGR
ALYGIFTIVMVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTLPVPFN
ILPSPKSVFYLLRRIFQFICCCCSCCKTNKPDYPPVPTFANPGAGTGPGEGERGSYRLRV
IKALVQRYIETARREFEETRRKDLGNRLTELTKTVSRLQSEVAGVRWTLVEGGPPRPPDG
ASILSRYITRVRNSFQNLGPPISETPELTLPGVVEAQATLETGPQNAGGARTPASGESGP
SSPAQVLVHREQEAEGAGDLLHEESLGTKGES
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggcacctgtgaagatcagccatgtggtgtcattttcctctcaggatcctaagtatcct
gtggcgaacctactgaacccagacagtcagaggggaccttggctcagctgccctcaggac
aaaagtgggcaactgaaagtggaactgcagttggagagagcagtgcccattggctacatt
gatgttggtaactgtggctgtgctttcctgcaaattgatgtgggtcgttcttcctggtcc
ctggacagacctttcatcaccctgctccctgcaaccatgcttatgtccctagctgattca
aagcaggggaagaacctctcaggggtccgcatgtttaaagatgatgatttcctggcccca
gcctcaggtgagtcatgggatcgacttcgtctcacctgctcccaacccttcacacgtcat
cagtcctttggcctggccttcctgcgggtccgttcctctctggactccttagatgatccc
atgacaggcccctcagccctcgtgagctctggggtgagccaggagtcttctgatgctcag
gagtctgcttctagcccctggctggctaatccttccatccggaggaccttcttcccagat
ccccagaagagcacaaaggaaatttcagagctcaagaatgttctaaagcagctgcagcca
ggaactctggggcgttcagcccgcatggtgctttcagctgcccgcagggtgcagccagcc
agtgtggcagacccaaggaacaaccacacagagcaaagtcacagtcatcctgatagctca
gagcccagaccagaggagcaaaactcagagaatgacatgggcaggacgaagagacggaag
gtccaggaccgaagatttctgtctaactctcggccagacgggagagggacagcacgacaa
catcaaccccaaacccaaagcaatggacagaggcgacaacaccaaccccaaacccaaagc
aatggacagaggcgacaacaccaaccgcaaacccaaagcaatggacagaggcgacaacat
caactccaaacccaaagcaatgatgtccaggatagtggacaatgccccatttgtgctggc
tcctttgccattgagattctccccctgcacgctgccacttgtggagagaccttcccagct
catccagcctctccctgttcatcaccatcttcatcccagtctgtagtgagatttcactgt
atgacactaacaccagctcccctggtccccaggccacagccttactggtctgagatcatg
aacaaaaagctgaagttcccacctccactcctgggtgccatccaggaggggcggctaggc
tttgtgcagcagctgctggaatcagggttggagggcacaggtggcagtgggcccctgagg
aatgtggaggagtccgaggaccgctcctggagggaagctctcaacctgaccatccgcctg
ggccatgaggccatcactgatgtgcttttggccaatgtcaagtttgacttcaggcagatc
catgaagcactgctagtggcagtggatacaaaccagccagcagtggtgcgtcgcctgctg
gcccggttggatcgggagaagggccgcaaagtagacactagatctttctcactggctttc
ttcgactcatcaatcgatggttcccgctttgcgcctggtgtcactccactcaccctggcc
tgccagaaagacctgtatgagattgcacagctgctcatggatcagggccacaccatcgcc
cggccccacccagtctcctgtgcctgcctcgagtgcagcaacgcccgccgctatgacttg
ctgaagttctccctgtcacgcatcaacacctaccgtggtattgccagcagggcacacctc
tcactggccagtgaggatgccatgctggctgccttccagctcagccgtgagctcaggcgc
cttgcccgcaaggagccagagtttaagcctgagtacattgccctggagtcgctgagccag
gactacggctttgagctgctgggcatgtgccggaaccagagcgaggtcactgcggtgctc
aatgacctgggcgaagacagcaagactgagcccgaggctgagggcctgggccaggcattt
gaggagggcatccccaacctggcaaggctgcgactggccgtcaactacaaccagaagcgg
tttgtagcacaccccatctgccagcaagtcctgtcctccatctggtgtgggaacctggct
ggctggcgtggaagcaccaccatctggaagctctttgtctctttcctcatcttcctcacc
atgccctttctctgccttggctactggctggcacccaagtcccagctgggccgcctgcta
aagatcccagtgctgaagtttctgctgcactccgcctcctatctgtggttcctcatcttc
ctgctaggagagtccctggtcatggagacgcagctcagcaccttccatgggcgcagccag
agtgtctgggagacttccctacacatgatttgggtcacaggcttcctctggtttgagtgt
aaggaggtgtggattgagggcctgcgcagttacctcctggattggtggaacttcctggac
atggtcatcctgtccctgtacctagcggcctttgcactgcgcctccttctggctgggctt
gcccacatgcactgccaggaggccccagatgggactgcctgccactatttcactaccact
gagagaagtgagtggcgcaccgaggatccccagttcttggctgaggtgctctttgctgtc
accagcatgctcagcttcacccgcctggcctacattctgccagcccatgagtcactgggc
actctgcagatttccattggcaagatgatcgacgacatgatccggttcatgttcatcctc
atgatcatcctgactgccttcctctgtggcctcaacaacatctacgtgccctaccaggag
acggagcggctgggcaatttcaacgagacattccagtttctgttctggaccatgtttggc
atggaggagcacagcgtggtagacatgcctcagtttctggtgcctgaattcgtgggccgg
gccctctacggcatctttaccatcgtcatggtcattgtgctgctcaacatgcttattgcc
atgatcaccaactccttccagaagattgaggatgatgctgatgtggagtggaagtttgct
cgctccaagctctacctgtcctacttcagagaaggcctgacgctgcctgtgcccttcaac
attctgccctcccccaagtctgtcttctaccttctcaggagaattttccagttcatttgc
tgttgctgctcctgctgcaaaaccaacaaaccagactatcccccagtccccacctttgcc
aatcctggggcagggacaggacctggggagggagaacgaggatcctaccggcttcgtgtt
atcaaggccctggtccagcgctacatagagacagcccggcgtgagtttgaggagactcgt
cggaaagacctgggcaacagacttacagagctgacgaagaccgtatctcgactgcaaagt
gaggtagctggtgtacggtggactctggtggaaggaggaccaccccggccacccgatggt
gccagcatcctcagtcgctacatcacccgagtgcgtaacagcttccaaaacctggggccc
cccatctctgagacaccagagctaacattgccaggggttgtagaagctcaagcaacttta
gaaactgggcctcagaatgctggaggggctaggactccagcttctggagagtctggcccc
tcttccccagctcaagtgctagtgcatagggaacaggaagcagagggggctggggacctg
ctccacgaggagagcttggggaccaagggagagtcctag
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