Loxodonta africana (African savanna elephant): 100675493
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Entry
100675493 CDS
T04351
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X2
KO
K05236
coatomer subunit alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100675493 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lav04147
]
100675493 (COPA)
Membrane trafficking [BR:
lav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100675493 (COPA)
Exosome [BR:
lav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100675493 (COPA)
Exosomal proteins of bladder cancer cells
100675493 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
100675493
NCBI-ProteinID:
XP_003415233
UniProt:
G3T6Z3
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSIILFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATEGLGDDGKGQEEGGGWDVEEDLDLPPELDVPTGAGGGA
EDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFAPYKQLFLQT
YARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVGKF
EEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQQK
RICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQTR
KILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFQGQICR
VTTVTEIGKDVIGLRISPLQFR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa
agaccctggatcctgaccagtttgcacaatggggtcatccagctttgggactatcggatg
tgtaccctcattgacaaatttgatgaacatgatggtccagtacgaggcattgacttccat
aagcagcaaccactgtttgtctctggaggagatgactataagattaaggtttggaattac
aagcttcgacgctgtcttttcacattgcttgggcacttagattatatccgcaccacgttt
tttcatcacgaatatccttggattctgagtgcctcagacgatcagaccatccgagtgtgg
aactggcagtctaggacctgtgtctgcgtgttaacggggcacaaccattatgtaatgtgt
gctcagttccacccctccgaagacctggttgtatcagccagcctggaccagactgtacgc
gtttgggatatttctggtctaaggaaaaaaaacttgtcccctggtgcagtggagtcagat
gtgagaggaataactggggtcgatctgtttggaactacggacgcagtggtgaagcatgtg
ctggagggccatgatcgtggagtaaattgggccgctttccaccccactatgccccttatt
gtatctggggcagatgaccgtcaagtgaagatctggcgcatgaacgaatcaaaggcatgg
gaggttgatacctgccgaggccattacaacaatgtatcttgtgctgtcttccaccctcgc
caagagttgatcctcagcaattctgaggacaagagtatccgggtgtgggatatgtctaag
cggactggagttcagaccttccgcagggatcatgatcggttctgggtcctggctgcccac
cccaacctcaacctgtttgctgcaggacacgacggtggcatgattgtgtttaaactggaa
cgggaacggccagcctatgctgttcatggcaacatgctgcattatgtcaaggaccggttc
ttgcgtcagttggatttcaatagctccaaagatgttgctgttatgcagttacggagtggt
tccaagtttccagtgttcaatatgtcatacaatcctgcagaaaatgcagttctcctgtgt
acgagagccagcaacttagagaatagcacttatgacctgtacaccatccccaaggatgct
gattcccagaatcctgatgcccctgaagggaagcgatcctcaggcctgacagccgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctaatcaagaaccta
aagaacgagatcaccaaaaaggtacaggtgcccaactgtgatgagatcttctatgctggc
acaggcaacctcctgcttcgagacgcggactccattatactctttgatgtacagcagaag
cgaactctggcatcggtgaagatttccaaggtgaaatatgtgatctggtcagcagacatg
tcccatgtagcactactggccaaacatgccattgtgatctgtaaccgcaaactggaggct
ctgtgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgagagtggggta
tttatctataccacaagcaaccacatcaaatatgctgtcaccactggggaccacgggatc
atccgaactctggatttacccatctacgtcacacgggtgaagggcaacaatgtatattgc
ctagacagggagtgtcgtcctcgggtactcaccattgatcccactgagttcaagttcaaa
ttggccctgatcaacaggaaatatgatgaggtgctgcacatggtgaggaatgccaaactg
gtaggccagtccatcattgcttatctccagaagaagggctatcctgaagtggcactgcac
ttcgtcaaggatgagaaaactcgctttagcctggcactggagtgtggaaacattgagatt
gctctggaagctgccaaagcactggatgataaaaactgctgggaaaagctgggagaagtg
gccctactacaggggaaccaccagattgttgaaatgtgctaccagcgcacgaaaaatttt
gacaaactttccttcctgtaccttattaccggcaacctagagaaacttcgcaaaatgatg
aagattgctgagattcgaaaggacatgagcggtcattatcagaacgccctgtacctgggc
gatgtgtcagagcgagtgcggatcctgaagaattgtgggcagaagtcactagcgtatctc
acagcggctacccatggcttagatgaagaagctgagagcctgaaggagacatttgatcca
gagaaggagacaatcccagacatcgaccctaatgctaagctgctccagccacctgcacct
atcatgccattggataccaattggccgctgttgactgtgtccaaaggattctttgaaggc
tccattgccagcaaagggaaggggggagccctggctgctgacattgacattgacactgtt
ggtactgagggctggggagaggatgcagagctgcagctggatgaagatgggtttgtggag
gccacagaaggtttgggggatgatggcaaaggacaggaagaaggaggtggttgggatgta
gaagaggatctggaccttccccctgagctggacgtacccactggggcaggtggtggagct
gaggatggcttctttgtgcctcccaccaagggaaccagcccaactcagatctggtgcaat
aactctcagcttccagttgatcacatcctggcaggctcttttgaaacagccatgcggctc
cttcatgaccaggttggagtaacccagtttgccccctacaagcaattatttctgcagaca
tatgcccggggccgtaccacgtatcaggctctgccctgcctgccctccatgtatggctac
cctaatcgcaattggaaagacgcagggttgaaaaatggtgttccggctgtgggcctgaag
cttaatgacctcatccaacggctgcagctgtgctaccagctcaccacagttggcaagttc
gaggaggctgtggaaaagttccgctccattctactaagtgtgccactccttgttgtggat
aacaaacaggagattgcagaggcccagcagctcatcaccatttgtcgtgagtacattgtg
ggtttgtccatggaaatagaaaggaaaaagctgcccaaggaaactctagaacagcagaag
cgcatttgtgagatggcagcctatttcactcactcaaacctgcagcctgtgcacatgatc
ctggtgctgcgcacagccctcaacctctttttcaaactgaagaacttcaagacagctgcc
acctttgctcggcgcctgctggagcttgggcccaagcccgaggtggctcaacagacccga
aaaatcctgtctgcatgtgagaagaaccccacggatgcctaccagctcaattatgacatg
cataacccctttgacatttgtgctgcatcttatcggcccatctaccgtggaaagccagta
gagaagtgtccactcagtggggcctgctattcccctgagttccagggtcaaatctgcagg
gtgactacagtgacagagattggcaaagatgtgattggtctaaggatcagtcctctgcag
tttcgctag
DBGET
integrated database retrieval system
