Loxodonta africana (African savanna elephant): 100675595
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Entry
100675595 CDS
T04351
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03013
Nucleocytoplasmic transport
lav03015
mRNA surveillance pathway
lav03040
Spliceosome
lav05014
Amyotrophic lateral sclerosis
lav05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100675595 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
100675595 (ALYREF)
03015 mRNA surveillance pathway
100675595 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100675595 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100675595 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100675595 (ALYREF)
03041 Spliceosome [BR:
lav03041
]
100675595 (ALYREF)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100675595 (ALYREF)
TREX complex
100675595 (ALYREF)
Spliceosome [BR:
lav03041
]
Complex C
Other components
EJC/TREX
100675595 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100675595 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
100675595
NCBI-ProteinID:
XP_023412475
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MQVTTQSPPKEARRSRCQVRPQLPGHVGNPPRPPSTQASAARPEAGKGRGCVGKGAPPRP
RPQRLPSNPRTFYDLIGPAPPARPLAAPASAREGTGRRRTAGEWGAAGQPASGDAAGVSR
AGAARGLAGPGGGEGSKERSDPGAGAREVWAGARARDPGRYRRQRPSLVVCLIRAPGPRN
GQEPRVRWVRRRRESRARPGVRLTGLFLFLWVFRPLQPKQLPDKWQHDLFDSGFGGGAGV
ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKA
MKQYNGVPLDGRPMNIQLVTSQIDTQRRPTQSINRGGMTRNRGSGAFGGGGARRGTRGGS
RGRGRGTGRSSKQQLSAEELDAQLDAYNARMDTS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaacgacccagtcaccgcccaaggaagctcggcgttcccgctgccaagtcagg
cctcagctccccggccacgtcgggaacccacctcggccgccctccacccaggcttccgca
gcgcgacccgaggccggcaaagggcggggctgcgtgggaaagggcgccccgcccaggccc
cgcccccaacggctgccgtccaacccgcgcaccttctacgacctaatcggcccggccccg
cccgcccgtccgttggcagcgccggcgtccgcgcgggaaggaaccggccggcgccgtaca
gccggtgagtggggggcagccggacagccagcctccggggacgcggcgggagtgagccgg
gcgggagcggctcgcggcttggccgggcccgggggcggagaggggtcgaaggagcggtcg
gacccgggtgccggcgcccgcgaggtgtgggcgggggcgagggcgcgcgacccgggcaga
taccggagacagagaccttctctggtcgtttgtcttattcgggccccggggcctcgtaac
ggccaggagccgagggtgcgctgggtgcgacggcggcgggaatcgcgagcgaggcctgga
gtgcgattgacgggcctatttctgtttttgtgggtttttcgtccccttcagccgaaacaa
ttgccagacaaatggcaacacgaccttttcgacagcggctttgggggcggtgctggcgtg
gagaccggtgggaaactgctggtgtcaaatctggattttggagtgtcggatgctgatatt
caggaactctttgctgaatttggaactttaaagaaggctgcagtgcactatgaccggtct
ggccggagtttaggaaccgctgacgtgcactttgagcggaaggcggatgccctgaaagcg
atgaaacagtacaatggcgtgccattggacggtcgccccatgaacatccagctggtcaca
tcacagattgacacacaacggagacctacacagagtataaacagagggggcatgactaga
aaccgtggctctggagctttcggtggcggtggcgcccggagaggcacccgtgggggcagc
cggggacgaggcagaggaactggcaggagttcaaagcagcagctttcagcagaggagttg
gacgcccagttggatgcttataacgccaggatggacaccagctaa
DBGET
integrated database retrieval system
