Loxodonta africana (African savanna elephant): 100675596
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Entry
100675596 CDS
T04351
Symbol
POLR1B
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100675596 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100675596 (POLR1B)
Enzymes [BR:
lav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100675596 (POLR1B)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100675596 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
100675596
NCBI-ProteinID:
XP_003417447
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MEPSGRWQNLPSGASLKHLTDPAYAIRGEQKXPALQELPRARLSPSNFAVREGLSHAVQA
IPPFEFAFKDERISLTIVDAVISSPTVPKGSICKELKVYPAECRGRRSTYRGKLTADISW
AVNGISKGIIKQFLGYVPIMVKSKVCNLHSLPPKALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMIRPKWKSRGLGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIRGKEDDSFFRNSVSQMLRIVTEEGCSTQKQV
LNYLGECFRVKLNLPEWYPNEQAAEFLFDQCICIHLNSNTEKFYVLCLMTRKLFALAKGE
CMEENPDSLMNQEVLTPGQLFLMFLKEKMEAWLVSIKIAIDKKAQKINLSINTENLMKIF
NMGTDLTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTTSIPALLCNLGVT
PVDGAPHRPHSECYPVLLDGVMVGWVEKDLAPGIAESLRRFKVLREKRIPPWMEVALIPM
TGKPNLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQVFMNIAIFEDEVFAGVTTHQE
LFPHSLLSVIASFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLPFIGAQLQYGDPYYSYLNLNTGENFVVY
YKSKENCVVDNIKVCSNDTGSGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGLELKADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPVGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIRVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggagcctagcggccggtggcagaacctgcctagcggggctagcctaaagcacctgacc
gaccccgcttacgcgatccgcggggaacagaaatagccagcgttgcaggagctgccgcgg
gccaggttgagtccttccaacttcgcggtgcgagaaggactcagccacgcagtgcaggct
atacctccctttgaatttgcttttaaagatgagcgtatctctcttaccattgtggatgct
gtcatcagttcacccacagttcctaaagggagcatctgcaaggagctcaaagtttaccca
gcagaatgccggggccggagaagtacctaccggggaaagctgacagctgatatcagctgg
gcagtgaatggaatctcaaaaggaatcattaaacagtttcttggttatgtgcctatcatg
gtgaagtccaaggtttgcaacttacacagccttcctccgaaagccctgattgagcaccat
gaggaagcagaggaaatgggaggctattttataatcaatggcattgaaaaagtcatccga
atgttgattatgcctcggagaaatttccccatcgcaatgataagaccaaaatggaaaagt
agagggcttggctatactcagtatggagtttcaatgcactgtgtcagggaagaacattcc
gctgtcaacatgaaccttcactacttggaaaatggtactgttatgttgaactttatttac
cggaaagagctgtttttccttcctttgggatttgcacttaaggcgcttgtcagtttttcc
gattatcagatttttcaggagctcatcagaggaaaagaagatgactctttctttaggaac
tctgtttctcagatgttaaggattgtaacagaagaaggttgttccacacaaaaacaggtc
cttaactatctaggtgaatgcttcagagtaaagctcaatcttccggagtggtatcccaat
gaacaagcggcggagtttctgtttgaccagtgcatctgtatccacttaaattccaatact
gagaagttttatgtgctttgtctcatgacccggaaactctttgctttagccaaaggagag
tgcatggaggagaatcctgatagtttaatgaatcaagaagtccttacacccggtcagctc
ttccttatgtttctgaaggaaaaaatggaagcttggttagtgtctattaaaatagctata
gacaagaaggctcagaagatcaatttatccataaacactgaaaatttgatgaagattttt
aatatgggaacagaccttacgagaccctttgagtatcttcttgctactgggaatctacgt
tctaaaacaggtcttggcttcctgcaagattctggactgtgcgttgtggctgacaagctg
aacttcatacgctacctttcccatttccgctgtgtgcacagaggggctgattttgccaag
atgaggaccaccacagtacgcaggctgcttccagagtcctggggtttcctctgtcctgtg
cacaccccagacggggagccctgtggtctgatgaaccacttaactgctgtgtgtgaggtt
gtcactcagtttgtatatacaacgtctattccagcattgctctgcaatttgggggtcact
ccagttgatggagctccacatcgaccgcacagtgagtgctaccctgtcctgttggatggt
gtcatggtcggctgggtggagaaggaccttgctcctggcattgcagagtcactccggcgt
tttaaggtgctgagagaaaaaagaattcctccgtggatggaggtggccctcatacccatg
acaggaaaacccaatctgtacccagggctattcctttttaccaccccttgtagactggta
cggcctgttcagaacttggaattaggcaaagaagaactgatcggaactatggaacaggtc
ttcatgaacattgctatctttgaggatgaggtttttgctggagttaccacacaccaggag
cttttccctcacagcctgctgagtgtgattgccagcttcatccctttctctgatcacaac
cagagtccacggaacatgtaccagtgccagatgggtaagcaaactatgggctttccactt
cttacttatcaggaccggtcagataataaactgtatcgtcttcagactcctcagagtcct
ttagtgaggccgtacatgtatgattattatgacatggataactatccaatcgggacaaat
gccatcgttgctgttatttcttacaccggctatgacatggaagatgccatgattgtgaat
aaggcctcttgggaacgaggcttcgcccatggaagtgtgtacaagtctgagttcatagat
ctctctgaaaaaattaaacaaggagatgatagtctggtgtttggagtcaaaccgggtgat
ccacggattttgcagaaattagatgatgatggattgccatttattggagcacagttgcag
tatggagacccatattacagctacctgaacctcaatactggggaaaactttgtggtctac
tataagagtaaagaaaattgtgttgtagataacatcaaagtgtgtagtaacgatactgga
agtggaaagttcaagtgtgtgtgcatcaccatgagagtccctcggaatccgaccatcgga
gacaaattcgccagccgacatgggcagaagggcattttgagcaggttgtggccagttgag
gacatgccctttactgagagtgggatggtcccagacattctcttcaatcctcatggtttt
ccatcccgcatgaccattggcatgttaatcgagagcatggcagggaagtccgcagcgttg
cacggtctctgtcatgatgctacacccttcatcttttcagaggagaactctgccttagaa
tactttggtgagatgttgaaggctgctggctacaacttctatggcaccgagagactgtat
agtggcatcagtgggctagaactgaaagcagacattttcataggtgtggtttattatcaa
cgcctacgccacatggtctccgacaagtttcaggttagaaccacaggagccagagacaaa
gtcaccaaccaacctgtcgggggaagaaatgtgcagggtggaatccgttttggggagatg
gaacgagatgctcttttagctcacggtacatcttttctgcttcatgaccgcctcttcaac
tgttctgaccgttcagtagcccacgtgtgcgtaaagtgtggtagtttactctctccgctg
ctggagaagccacccccttcgtggtctgccatgcgcaacagaaaatacaactgtactctt
tgtaaccgcagtgacactatcgacaccgtttctgtgccttacgtttttcggtattttgta
gctgaactggcagcaatgaacatcagagtgaaactggatgttgtttaa
DBGET
integrated database retrieval system
