Loxodonta africana (African savanna elephant): 100675666
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Entry
100675666 CDS
T04351
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100675666 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lav01009
]
100675666 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100675666 (PCDH11X)
Protein phosphatases and associated proteins [BR:
lav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100675666 (PCDH11X)
Cell adhesion molecules [BR:
lav04515
]
Cadherins
Protocadherins
100675666 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
FAM47
Drf_FH1
LYRIC
DUF6377
Motif
Other DBs
NCBI-GeneID:
100675666
NCBI-ProteinID:
XP_003412743
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MVGLLIFFFIFLFLLLLFLSPPLFLPFLFFSLLVLCGLIQRTVTIVPGMDLLSGTYIFAV
LLACVVFQSGAQEKNYTVREEMPENVLIGDLLKDLNLSLIPHKSLTSPMQFKLVYKTGDV
PLIRIEEGSGEIFTTGVRIDREKLCAGILVDAHCFYEVEVAVLPDEIFRLIKIRFLIEDI
NDNAPLFPTTVINISIPENSAINSRYALPAAIDPDVGINGVQNYQLIKGQGVFGLDVIET
PEGQKMPQLIVQKELDREEKDTYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVFKEN
EIEVSIPENAPVGTSVTQLHATDADIGENARIHFFFSNLVSNMAKRLFHLNDTTGLITIK
EPLDREESPNHKLLVLASDGGSMPARAMVLVNVTDVNDNVPSIDIRYIINPINGTVVLSE
NAPFNTKIALITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLETASHLDYESTREY
AIKLLAADAGKPPLNQSSMLLVKVKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATD
ADSGRNAEISYLLGVDAPSEFDLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLMT
NATVLVTVLDQNDNSPVFTHNEYNFYVPESLPRHGTVGLITVTDLDYGENSAVTLSILDV
NDDFSIDPQTGVIRPNISFDREKQESYTFHVKAEDAGRVSRSSTAKVTINVVDVNDNKPV
FVVPPTNYTYELVLPSTNPETVVFKVVAVDNDTGTNAELRYSIVGGNTKGLFIIDETTGN
ITLKEKCVAADLGLHRLVVKANDLGQPDSLFNIIIVNLFVNESVTNATLIYELVRKSIEN
PETENIETTQAPSPSTDYVKIMVAIVAGTITVVLVLLIAAVVRCRQSPHLKAAQKNKQNS
EWVTPNPENRQMIMMKKKKKKKKHAPKNLLLNFVTIEEAKTDDADTDGNSITLDLPIELE
DQAMGTYSWGTTPTTFKPDSPDLAQHYKSASPQPAFQIQPETPLNSKHHIIQELPLDNTF
VACDSISKCSSSSSDPYSVSECSYSVTTFKAPVSVHVRPTMKEVVRSHTPMKESTTVEIW
THPQPQRKSEGKKPGKPQRHVTFHLPEGSQESSSDGGLGDHDAGSLPSTSHALPLGYPQE
EYFDHAAPYNRTEGDGNSDPETTFIPGLKKAAEVTVEPTVEEASDNCTQECLILGHSDAC
WMPASLTHSSPSQAQASAHRSSPPVTQTIALCHSPPVTQVIALCHSPPPAQASALHHSPP
LAQATVLRHSPPPAQVSALCYSPPLAQAAAIHRSPPLPQVAALRHSPAQPPMGLQQGWVQ
GAGSDVQQSFDQGGQGSPRSQFYTMSERLHPSDDSIKVIPLTTFTPGQQARPPRGDSPIM
EEHPL
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggttggtttgttaatctttttctttatcttcctctttcttctccttctctttctgtct
cctcccctttttctaccctttctttttttttctttgttagttttgtgtgggctgatacag
agaaccgttacaatcgtgcctggtatggacttgttgtccgggacgtatatatttgcggtc
ctgttagcatgcgtcgtgtttcagtctggcgcccaggagaaaaactatacagtaagagaa
gaaatgccagaaaacgtcctgataggggacttgctgaaagacctgaacttatcactgatc
ccgcacaagtccttgacatctcctatgcagttcaagctagtgtacaagactggggatgtg
ccactgattcgaattgaagagggtagcggtgaaatcttcactactggtgttcgcattgat
cgtgagaagttatgtgctggtatcttggtggatgcccattgcttttacgaagtggaggtt
gccgttttaccggatgaaatatttagactgattaagatacgttttctgatagaagacata
aatgataatgcaccattattcccaacaacggttatcaacatatcaattccggagaattca
gctataaattcccgatatgctcttccagcggccattgatcctgacgtaggaataaatgga
gttcaaaactaccaactaattaagggtcaaggtgtatttgggcttgatgtcattgaaaca
ccagaaggacagaagatgccacaactaatcgttcaaaaggagttagatagggaagagaag
gatacatatgtaatgaaagtaaaggttgaagatggcggctttcctcgaagatccagtact
gctattttgcaagtaagtgtagctgatacaaacgacaaccacccagtcttcaaggagaat
gagattgaagtcagtataccagaaaatgctcctgtaggtacttcagtgacacagctccat
gccacagatgccgacataggtgaaaatgccaggattcacttctttttcagcaatctagtc
tctaacatggccaagagactgtttcacctcaacgacactactggacttatcacaatcaaa
gaaccactggatagggaagaatcaccgaaccacaaattacttgttttggcaagtgatggt
ggatcgatgccagcaagagcaatggtgctggtaaatgttacagatgtcaatgacaatgta
ccatcaattgatataagatacatcatcaatccaatcaatggcactgtggttctttcagaa
aatgctccattcaacaccaaaattgctcttataactgtaacagataaggatgctgaccat
aatggaagggtgacatgcttcacagatcatgaagtccctttcagattaaggccagtgttc
agtaatcagttcctcctggagacggcttcacatctcgactatgagtccacaagagaatac
gccattaaattactggccgcagatgctggcaaacctcctttgaatcaatcatccatgctc
ctcgtcaaagtgaaagatgaaaacgacaatgctccggttttcacccagcctttcataagt
ctttctgttcctgagaataattctcctggcacccagctaacaaaaataagtgcaacagat
gcagacagtgggcgtaatgctgagatcagttacctgctaggtgttgatgctccgtctgaa
ttcgacctagatcatcgtacaggcatcctgactgcagtgaagaaactggatagggaaaag
caggaaaaatattctttcacagttctggcaaaagataatgggataccacccttgatgacc
aatgccacagtcttagtgaccgttcttgatcagaatgacaacagcccagttttcactcac
aacgagtataacttctatgtccctgaaagccttccaagacatggcacagtaggactaatc
actgtaactgatcttgattatggagaaaattctgcagtcactctctcgattttagatgtg
aatgatgatttctctattgatccacaaactggtgtcatccgaccaaatatttcgtttgat
agagaaaaacaagaatcttacactttccatgtaaaggctgaggatgctggtagggtatca
cgttcttcgacagccaaagtgacgataaatgtggtcgacgttaatgataacaaaccagtt
tttgttgtccctcctaccaactacacttatgaattggttctaccatccactaatccagaa
acagtggtcttcaaggtagttgctgttgacaatgatactggtacgaatgcagagcttcgt
tacagcattgtgggaggaaatacaaaaggtctgtttataattgatgaaacaacaggcaac
attacactgaaggagaaatgtgttgctgcagatcttggtttacacagactggtagtcaaa
gctaatgacttaggacaacctgattctctcttcaatattataattgttaatctattcgtg
aatgagtcagtgaccaatgctacactgatttatgaactggtgcgcaagagcattgaaaat
cctgagaccgaaaatattgagacaactcaggcaccctcaccaagcactgactatgtcaag
atcatggttgctatcgttgctggcaccataactgtggttctagtacttctcatcgctgct
gtggtgagatgtcgccagtccccacaccttaaggctgcccagaaaaacaagcagaattca
gaatgggttactccaaacccagaaaataggcagatgataatgatgaagaagaagaagaag
aagaagaagcatgcccctaagaacctgctgcttaactttgtcactattgaagaagctaag
acagatgatgctgacactgatggaaacagcatcacactagaccttcccattgagctagaa
gaccaagccatgggcacctacagctggggcacaacacctactacttttaagcctgatagc
cctgatttggcccagcactacaaatctgcctctccacagcctgccttccagatccagcct
gaaactcccctgaattcgaagcaccacatcatccaggaactgcctcttgataacaccttt
gtggcctgtgattccatttccaagtgttcctccagcagttctgatccctacagcgtttct
gagtgcagctattcagtgacaacctttaaggcccctgtgtctgttcacgtcagaccgaca
atgaaggaggttgtgcgatctcacacccccatgaaagaatccaccactgtggagatctgg
actcatcctcagccacagcggaaatctgaggggaaaaagccaggaaagccccagcgccat
gtcacatttcatctaccagaaggctctcaggaaagcagcagtgatggtgggctgggagac
catgatgcaggcagccttcccagcacatcacatgccctgccccttggatatcctcaggag
gagtactttgatcatgctgcaccctataaccgtactgaaggggatggcaactctgatcct
gaaactactttcattcctggactaaagaaagctgcagaagtgactgttgaaccaactgtg
gaagaggcctctgacaactgcactcaagaatgtctcatcttgggtcattcggatgcctgc
tggatgccagcttctttgacccattccagcccttcgcaagcacaggcctctgctcaccgc
agcagccctccagtgacacagaccattgctctctgccacagccctccagtgacccaggtt
atcgcactgtgccacagccctccaccagcacaggcctctgctctccaccacagtcctcct
ctagcacaggctactgtgcttcgtcatagcccaccaccagcacaggtctcagccctctgc
tacagcccccccttggcacaggctgctgcaatccaccgcagccctcctctgccacaagtt
gctgccctccgtcacagccctgcacagccaccaatgggtttgcagcaaggttgggtgcaa
ggtgctggatctgatgtacagcagtcttttgatcagggaggacaaggtagtccaaggtct
cagttttacaccatgtctgaaagacttcatcccagtgatgattcaattaaagtcattcct
ctgactaccttcactccaggtcaacaggccagaccccctaggggtgattcccccataatg
gaagaacatcccttataa
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integrated database retrieval system
