Loxodonta africana (African savanna elephant): 100675706
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Entry
100675706 CDS
T04351
Symbol
SCAF8
Name
(RefSeq) protein SCAF8 isoform X3
KO
K13191
RNA-binding protein 16
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100675706 (SCAF8)
03041 Spliceosome [BR:
lav03041
]
100675706 (SCAF8)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100675706 (SCAF8)
Spliceosome [BR:
lav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100675706 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100675706
NCBI-ProteinID:
XP_003404002
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLY
VIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFK
SEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVSQITN
TDTLAAVAQILQSPQGQQLQQLIQTLQLQQQKPQPSILQALDAGLVVQLQALTAQLTAAA
AAANTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPASQLPHVSESVNNSIFHQLA
EQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEANLDD
SIDIQQQDMDIDEGQDVVEEIFEQEAKKVAVRSRSRTRSRSRSRSPRKRRSRSRSGSRKR
KHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVD
KKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIK
IAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWETVKSA
EPVKETVQTTQSPPPPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMP
VPPPGFSPLPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVPTSLVQPPLSMTP
ETVKDVGFGSLVLPGGSVASSLATSTLPAGNVFNPPTKQAEPEEKGPHFTDHQISSGENP
RAVIPNDISSSPVILGGPPSNVTNNSGILGVQRSNVSSNSEILGVRPSNVSSGSVIIGAQ
PPNILNNSGILGIQPPSMSNSSGILGVLPPNMPNSAGLVGIQPPNVPNTSGLLGTQPPVG
PQNLPPLSITSQRMPAMPMLDIRPGLIPQAPGPRFPLMQPGIPPHRGLPPPSVLDSALHP
PPRGPFPPGDIFSHPERPFLAPGRQGIDNVPNPEKRLPLGNDNIQQEGDRDYRFPPIETR
ESISMPPPVDVRDVVGRPVDPREGPGRPPPLDGRDHFGRPPVDMRENLVRPGLDHLGRRD
HFGFNPDKHWGHRGDFDEREHRVLPVFSGPKGLHEERGRFRPGNYRFDPRSGPWNRGFGQ
EVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGRDRIPNTWVPPPHARVFDYFEGPT
SQRKGDNVPQVNGENTERHAQPPPLQVQSDPELYEKLASSSEINKEKSDTVADIESEPVV
ESTETEGT
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggacacaagaagcatattatattccctgaatgactacaaaccacccatttctaaagcg
aaaatgacccagattactaaggcagccatcaaagctattaagttctataaacatgtggta
cagagtgtggaaaaattcattcagaaatgtaaaccagaatacaaggtacctgggctttat
gttattgactccattgtacgacagtcccgacatcagttcggtcaagaaaaggatgtgttt
gcacccagatttagtaataacatcattagcactttccagaatttgtatcgttgtcctggg
gatgacaagagtaagatagtgagagtattaaacttgtggcagaagaataatgtatttaag
agtgagattattcaacctcttttggatatggcagcagggattcctcctccagttgtcacc
cctgttttggccagtactactgctgctatgagcaataccccaggaactcctgtgacacct
gttactccagccaatgtggtccaaggtttacctgatccctgggtgtctcagataacaaat
acagacacacttgcagcagtggctcagatcttacaaagtcctcaaggtcaacagcttcag
cagttaatacagactttacagctacaacagcagaagccccagccttccattctgcaagcc
ctggacgctggtcttgtagttcagctgcaggcgctcacagcacaacttacggctgcagct
gcagcggccaacaccctgaatcccctagaacagggagtgtcttttaacaagaagctgatg
gataggtttgattttggagaagattctgagcatagtgaagaacccaaaaaggaaattcca
gcttctcagcttcctcatgtttcagagtctgtgaacaattccatttttcatcagttagca
gaacaacttcagcagcaaaacctcgaacatcttcgacagcagctcctggagcagcaacag
cctcaaaaggcaacccctcaggatagtcaggagggaacatttgggtcagagcattcagcg
tctccgtcacaagggagcagccaacagcattttcttgaacctgaggcaaatttggatgat
tccatagatatccagcaacaggatatggatatagatgaagggcaagatgtggtagaagag
atctttgagcaagaagcaaagaaagtggccgttcgctcgagatcaagaacacgttcacga
tctcgttcaagatcaccaagaaaacggaggtctaggtcacggtctggttctcgaaaacgc
aaacacagaaagcgatcacgctcccgctcaagagagagaaagaggaaatcatcacgttca
tattcaagtgaaaggagagctagagaaagggagaaagaacgacagaaaaagggcttacct
ccaattagatctaaaacattaagtgtctgtagtactactctctgggttggtcaggtggac
aagaaagcgacacagcaggatttaaccaacctgtttgaagagtttggacaaatagagtcc
atcaatatgattcctcccaggggctgtgcttatgtctgtatggttcaccgacaagacgca
tttcgggctcttcagaaacttagttctggatcgtataaaattgggtccaaagtcatcaag
atcgcctgggctttaaacaaaggtgtaaaaacagaatacaaacaattctgggacgtggat
cttggcgttacgtatattccatgggaaaaagttaaagtggatgacttggaaggttttgca
gaaggaggcatgattgaccaggaaactgtaaatactgagtgggaaacagtgaaaagtgct
gaacctgttaaagagacggtccagacaactcagagtccaccacctccagttgaaaaggag
acagttgtcacaacccaggcagaggttttccctccacctgttgctatgttgcagattcca
gtagcgccagccgtgcctacggttagtttagtcccaccagcctttcctgtgtcgatgccg
gttcctcctcctgggttcagtccactgcctccacctccttttctacgagcaagttttaat
ccgtcacagccacctcctggtttcatgccacctccagttccaccacctgttgtaccacca
cctgctatcccaccggtagtaccaacatctttagtacagccgccattatccatgacgcca
gaaactgtgaaagatgttggttttggtagccttgttttgccaggtggttctgttgccagc
agccttgctacttctacactgccagctggaaatgtttttaatcctccaactaagcaagca
gagcctgaagaaaaaggacctcattttacagaccaccagatttcttctggtgaaaacccc
agagcagtgattccaaatgatatttcaagtagccctgtgattttagggggaccgccatca
aatgtgaccaacaactctggaattcttggagtccaaagatcaaatgtatcaagtaattct
gaaattcttggagtacggccatctaatgtttccagtggttctgtgattattggagcccag
ccaccaaatattctaaataactctggaattttgggaatacagcctccaagtatgtcaaat
agttctggaattttgggagtgctacccccaaatatgcctaatagtgctggactcgtagga
atacagccaccaaatgttcccaatacatctggacttttgggaacacagccaccagttggg
cctcaaaacttaccccctttaagtatcactagtcaaaggatgcctgcaatgcccatgtta
gacattcgtccaggactgataccacaggctcctggaccaagattccctttaatgcagcct
ggaattccaccccatcggggacttcctcccccatcagtacttgattcagctcttcaccca
ccaccccgtggtccttttcctccaggagatatttttagtcatcctgaaagaccttttcta
gctcctggaaggcaaggaatagacaatgttcctaatcctgaaaaaaggcttccacttgga
aatgataacattcagcaagaaggcgatagagattaccggtttcctcccatagaaaccagg
gaaagcattagtatgcctcccccggtggacgttagggatgtggttgggcgacctgtagat
ccaagagaaggtcctggaaggcctcctccattagatggtagggatcattttggaagacct
cctgtagatatgagagagaaccttgtgaggccaggtttagatcatcttggtcgaagagac
cattttggctttaatccagataagcactgggggcatagaggagattttgatgagagagag
catcgggttctgcctgtcttcagtggtccaaaaggcttacatgaagaaagaggtagattt
cggcctggaaactatagatttgatcctaggagtggtccttggaacagaggatttggacaa
gaagttcacagggattttgatgaccgaagaagaccctgggagaggcaaagggatagggat
gacagagattttgatttctgcagagaaattaatggaaatcgccttggacgagatagaatt
ccgaacacttgggtcccacctcctcacgctcgggtttttgattattttgaagggcccact
tcccaacgaaaaggtgataatgtgcctcaggttaatggtgaaaatacagagagacatgct
caaccaccacctttgcaagtacagagcgatcctgaactttatgaaaaactggcatcctca
agtgagataaacaaggagaagagtgacacagttgctgatatagaaagtgaaccagtggta
gaaagcacagaaactgaggggacataa
DBGET
integrated database retrieval system
