Loxodonta africana (African savanna elephant): 100675770
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Entry
100675770 CDS
T04351
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A isoform X2
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lav03041
]
100675770 (DDX39A)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100675770 (DDX39A)
Spliceosome [BR:
lav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100675770 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100675770
NCBI-ProteinID:
XP_003413378
UniProt:
G3TMJ5
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYEEDEEPQAPPESTPAPSKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAGFVLATLQQIEPVNGQVTVLVMCH
TRELAFQISKEYERFSKYMPNVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVR
NRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLNKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaggatgtggaaaacgagcttctggattacgaggaagatgaagagccccag
gcgcctccagagagcactccagctccatccaagaaagatgtcaagggttcctacgtttcc
atccacagctctggcttccgggactttctgctaaagccagagctactgagggccattgtg
gactgtggctttgagcacccatctgaggtccagcacgagtgtatcccccaagccatcctg
gggatggacgtcctgtgccaagccaagtctggaatgggcaagacagcgggtttcgtgctg
gccaccctgcagcagatcgagcccgtcaatggacaggtgacggtcctggtcatgtgccat
actcgggagctggccttccagatcagcaaggaatatgagcgcttctccaagtacatgcct
aatgtgaaggtgtcggtgttcttcggtggcctctccatcaagaaggatgaagaagtgctg
aagaagaattgtccacatgtggtggtggggaccccgggccgcatcctggcgcttgtgcgg
aacaggagcctcaacctgaagaatgtgaagcacttcgtgctggacgagtgtgacaagatg
ctggagcagctggacatgcggcgggacgtgcaggaaatcttccgcctgacaccccatgag
aagcagtgcatgatgttcagcgctaccctgaacaaggagatccggcctgtctgcaggaag
ttcatgcaggatcccatggaggtgtttgtggatgatgagaccaagctcacgctgcatgga
ctgcagcagtactatgtcaagctcaaggacagcgagaagaaccgcaaactcttcgatctc
ctggatgtgctggagtttaaccaggtggtgatctttgtgaagtcggtgcagcgctgcatg
gccctggcccagctcctcgtggagcagaacttcccagctattgccatccaccggggcatg
gcccaggaggaacgcttgtcacgatatcagcagttcaaggatttccagcggcgcatcctc
gtggccaccaatctgttcggccgagggatggacattgagcgagtcaacatcgtcttcaac
tacgacatgccagaggactcagacacctacctccaccgggtggcccgtgcaggtcgcttt
ggcaccaaaggccttgccatcacttttgtgtctgacgagaacgatgccaagatcctcaac
gacgtccaggaccggtttgaagtgaatgtggcagagcttccagaagaaattgatatttcc
acatacattgaacagagccggtaa
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