Loxodonta africana (African savanna elephant): 100675847
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Entry
100675847 CDS
T04351
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100675847 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lav03400
]
100675847 (XPC)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100675847 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
100675847
NCBI-ProteinID:
XP_010588237
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MGRRRAVGGEPRRRQPRGGKAEDRNPARREEEEEADVLEDEKPPKKTLLSKVSQGKKRKG
CSDPGGPADDGPAKKKVAKATAKSRRLKVIKDEALSDGEDFRNFPGAHKKAKHQKKEAPI
DEDSSEGEVEDESEEDWEEVEELSEPVPDDAGENAAFSKSVLPVNPVEIEIETPEQAKTR
ERSEKAKMEFETYLRRVMKRFTKEVHEDTHKVHLLCLLANGFYRNRICNQPDLRAIGLSI
IPTRFTKVPQRDVDVHYLSNLVKWFIGTFTVNTDLSYSEQDGLQTTLERRFAIYSARDDE
ELVHIFLLILRALHLLTRLVVSLQPIPLKLAAAKGKKPSKERSIEGPGGASETPSHIPEN
QTKPKARKGTKQEETFSKDTGNPSAKGKRGKAATGRKKQRAPSSSEEEGKGGEQEETQRK
RHGRGRRMASRVSYKEESGSDKASSDSDFELSGGEAHSSDEDSDPDLLRQRRAPAPKRTK
AASKSDSRTSRGSCPNPSGFPAASSSSSSKKRAKKVPHGGEEVEREKAAGVDQWLEVFCE
QKEEWVCVDCVHGVVGQPLTCYRYATKPMTYVVGIDNDGWVRDVTQRYDPAWMTVTRKCR
VDAKWWAETLRPYQSPFVDREKKEDLEFQTKHLDQPLPTAIGTYKNHPLYALKRHLLKYQ
AIYPETAAVLGYCRGEAVYSRDCVHTLHSKDTWLKQARVVRLGEVPYKMVKGYSNRARKA
RLAEPQLQDYNDLALFGRWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQLNLP
NLHRVARKLDIDCVQAITGFDFHGGYSHPVTDGYIVCEEYKEVLLDAWEKEQALIEKKEK
EKKEKRALGNWKLLAKGLLIRERLKLRYGAKSEAVALHTDAGGGGLSSDEEEGTSSQAEA
ARILAASWPQNRETEDQKQKCSKKTRRGKKEAASHLFPFEKL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggagacgtgctgtcggcggggagccgcggcgacgccagccacgcggagggaag
gctgaagaccggaacccggcccggcgtgaggaggaggaggaggcagatgtccttgaagat
gagaaacccccaaagaagacccttctttccaaagtttcacaaggaaagaaaaggaaaggc
tgcagtgatcctgggggcccagctgatgatggtccagcaaagaagaaagtggccaaggcg
actgctaaatccagacgactcaaggttataaaggatgaagccctcagtgatggggaagat
ttcaggaacttcccaggtgcccacaagaaggcaaaacatcaaaagaaagaggctcccatt
gacgaagatagcagtgaaggagaagttgaggacgaaagtgaagaggattgggaagaggta
gaagaacttagtgaacctgtgccagatgatgcaggagaaaatgcagccttctctaaatct
gttctgcctgtgaatcccgtggagatagagattgaaacaccggagcaggctaaaacaaga
gaaagaagtgaaaaggcaaaaatggagtttgagacatatcttcggagggtgatgaaacgc
ttcactaaagaagttcatgaggacacacacaaggttcaccttctgtgcctgcttgcaaac
ggcttctatcgaaatcgcatctgtaaccagccagatctgcgtgctatcggcctctccatc
atcccaacccgctttaccaaagtgccgcagagagatgtggatgtccattacctctccaac
ctggtgaaatggtttattggaacatttacagttaacacagacctttcatacagtgagcaa
gatggtctgcagactacattggaaaggagatttgctatttactctgcacgagatgatgaa
gaattggtccacatatttttactgattctccgggccctgcatctcctcacccgactcgtg
gtatctctacagccaattcctctgaagttagcagcagccaagggaaagaaaccttcgaag
gagagatccatagagggtcctggaggcgcctcagaaactcccagccacattccagaaaac
cagaccaagccaaaggccagaaaaggaactaaacaagaagaaaccttttctaaggacact
ggcaatccaagtgccaaagggaagagaggcaaggcagccacaggcaggaagaaacagaga
gcgccgtcctccagtgaggaagagggcaagggaggagagcaggaggagacccagagaaag
cggcatgggcgggggcggcgcatggcctcccgagtgtcttataaagaggagagtgggagt
gataaggccagcagtgactctgactttgagctctctggtggggaagcccattcatctgat
gaggattctgaccccgaccttctgaggcagaggcgggctccagctcctaagaggacaaag
gcggcgtccaagagcgactcccggacctcgcgtggaagctgccctaatccctcaggcttt
ccagcagcatcctcaagctcttcgagcaaaaagagagccaagaaagttccccatggtggt
gaggaggtagaaagagagaaagcagctggtgttgaccagtggctagaggtgttctgtgag
cagaaggaagagtgggtgtgtgtagactgtgtgcacggtgtggtgggccagcctttgacc
tgttacagatacgccaccaagcccatgacctatgttgtgggcattgacaatgatggttgg
gtgcgggacgtcacacagaggtacgacccggcctggatgacggtgacccgcaagtgccgg
gttgatgccaagtggtgggctgaaaccttgaggccataccagagcccatttgtggataga
gaaaagaaagaagatttggagtttcagaccaaacacctggaccagcctttgcccactgcc
atcggcacatataagaaccaccctctttatgccctgaagaggcatctcctgaaataccag
gccatctaccctgagacagctgcagtcctcggatactgtcgtggagaagctgtctactcc
agggactgtgtgcacaccctgcactccaaggacacatggctgaaacaggcgagagtggtg
aggctgggagaagtaccctacaagatggtgaaaggctattccaaccgggccaggaaagcc
cgtctggctgagccccagctgcaggattacaatgacctggccctgtttggccgctggcag
acagaggagtaccagcccccagtggctgtggacggaaaggtgcctcggaatgagtttggg
aatgtttacctcttcctgcccagcatgatgcctgtcggctgtgtccagctgaacctgccc
aacctgcaccgcgtggcccgcaagctggacattgactgtgtgcaggccatcacgggcttc
gacttccacggaggctattcccaccccgtaactgacgggtacatcgtctgcgaggaatac
aaagaagtgctcctggacgcctgggaaaaggaacaggcactcatagaaaagaaggagaaa
gagaaaaaggagaaacgggctctagggaactggaagctgctggccaaaggactgcttatc
agagagaggctgaagcttcgctatggggccaagagtgaggcagtagctctccacacagat
gcaggaggaggcgggctttcttctgatgaagaggaggggaccagctcccaagcagaagca
gccaggatcttggctgcctcttggccccaaaaccgagaaactgaagaccagaagcagaag
tgctctaagaagaccagaaggggaaagaaagaggcagcttctcatctgtttccatttgag
aagctgtga
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