Loxodonta africana (African savanna elephant): 100675965
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Entry
100675965 CDS
T04351
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
lav
Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lav04121
]
100675965 (TRIM56)
Enzymes [BR:
lav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100675965 (TRIM56)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100675965 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
100675965
NCBI-ProteinID:
XP_003416626
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLQVPKTLPCLHTYCQACLAQLAEGGHLRCPECR
EVVPVPPGGVAAFKTNFFVNGLLDLVTARAGGDLRAGKPACALCPLMGGTSTGGPATARC
LDCADDLCQACADGHRCTRQTHAHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVQARRPGLEELLAGVDNNLAELEAARMVEKEV
LARLREQAARVGMQVEEAAERVLRALLAQKQEVLGQLRAHVEAAEEAARGRLAELESQEQ
VARTAATFARRVLSLGREAEILSLEGAISQRLQQLQGCPWTPGPAPCVLPQLELHPGLLD
KNCHLLQLSFEEEQPQKDGGKDRAGIQGDDAAQSQGEDQTKTEKQGGGVQSQSRDVANFQ
KEEKAQIQREDGAQTPKEDRAQIPREDGEAQSQRSGRSNRRRKFKGRLKSVSREPSPTPG
PNLEGSGLLPKPIFSCSFPTRMPGDKWSPRITGLCPFGPQEILVADEQNKVLKRFSLNGD
YKGTVQIPEGCSPCSVAALQGAVAFSAGSRLYLITADGEVLWRRALSHSQASHAVAALPS
RDRVAVSVSGYVEVYNMEGSLATRFIPGGKASRGLRALVFLATSPQGNFVGSDWQQNSLV
VSDGLGQVIGEYSGPGLHGCQPGSVSVDKKGYIFLTLREINKVVVLDPKGSLLGDFLTAY
HGLEKPRVTTMVDGRYLAVSLSNGTIHVFRVRSSDS
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggtttctcaaggatcctcaccctccctcctggaggccctgagcagtgacttcctggcc
tgtaaaatctgcttggagcagcttcaggtgcccaaaaccctgccgtgcctgcacacctac
tgtcaggcttgcctggcccagctggccgagggcggccacctgcgatgtcctgagtgccgg
gaggttgttccagtgccaccaggtggtgtggccgccttcaagaccaacttctttgtcaat
ggactcttggacttggtgactgcccgggccgggggagacctgcgtgcaggaaagccagcc
tgcgccctgtgccccctaatggggggcaccagcactggagggccagctactgcccggtgc
ctggactgtgctgacgacttgtgccaagcctgtgctgatgggcaccgctgcacccgccag
acccatgcccaccgagtagtggacctggtgggctacagggcagggtggtacgatgaggag
gcccgggagcgccaggcagcccagtgcccccagcatcctggtgaggctcttcgcttcctg
tgccagccctgctcccaactgctgtgccgagagtgccgcctggacccccacctggaccac
ccatgcctgcccctggctgaggcagtgcaggccagacggccaggcctggaggagctgcta
gcgggtgtggacaacaacctggcagagctggaggctgcccggatggtggagaaggaagtg
ttggccaggctgcgggagcaggcggccagggtggggatgcaggtggaggaggccgccgag
cgagtcctccgggccctcctggcccagaagcaggaggtgctggggcagctccgggcccac
gtggaggctgctgaggaggctgctcgaggaagattggcagagctagagagccaggagcaa
gtggccaggacggcggccacatttgcccgccgggtgctcagtctgggtcgtgaggccgag
atcctctcactggagggggcgatttcccagaggcttcagcagctgcagggttgtccgtgg
acacctgggccagccccctgcgtgctcccccagctggagctccatcctgggctgctggac
aagaactgccacctgcttcagctctcctttgaggaggagcagccccaaaaggatggtggg
aaagatagagctggtatccagggagatgatgcagcccagagccagggagaagaccaaacc
aagacagagaaacagggtggtggagtccagtctcagagcagggatgttgccaacttccag
aaagaggagaaagcccaaatccaaagagaagatggggcccagacccccaaagaggacaga
gcccagatccccagagaagatggagaagcccagtctcagagaagtggcagatccaacagg
aggagaaaattcaaaggcaggctcaagtcagtttcccgggagcccagcccaacacctggt
ccaaacctggaaggctctggcctccttcctaagcctatcttttcctgcagcttccccacg
cggatgcctggagataagtggtctccccggatcaccgggctctgtccttttggcccccag
gagatcctggtggctgatgagcagaacaaggtgctgaagcgcttctccctcaatggtgac
tacaagggtactgtgcagatccccgagggctgctccccatgcagcgtggctgccctacag
ggcgcggtggccttctcagcaggctcacggctctatctcatcaccgctgacggtgaggtg
ctatggcgccgggcactgagccactcacaggctagccatgctgtggcggccctgccaagc
agagacagggtggctgtcagcgtgtcaggctatgtggaggtgtacaacatggaaggaagc
ctggccacccggtttatccctgggggcaaggccagccggggcctccgagcactggtgttc
ctggcaaccagcccccagggcaattttgtggggtcagattggcagcagaatagcttggtg
gtctctgatgggctgggtcaggtgatcggggagtatagcgggccagggctgcatggctgc
cagccaggctctgtgtctgtggacaagaagggttacatctttctgacccttcgggagatc
aacaaggtggtggtgctggacccaaaggggtcacttcttggagacttcctgacggcctac
cacggcttggaaaagccccgagtgaccaccatggtggacggtcggtacctagctgtgtcc
ctcagtaatgggaccatccatgtctttagggtccgctcttctgacagttaa
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integrated database retrieval system
