Loxodonta africana (African savanna elephant): 100676039
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Entry
100676039 CDS
T04351
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03013
Nucleocytoplasmic transport
lav05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100676039 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100676039 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100676039 (NDC1)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100676039 (NDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
100676039
NCBI-ProteinID:
XP_003411118
UniProt:
G3SRF8
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MPKGTSGRRRLPAFCTWELRVPECSAPPTRSQRANETTVPSMQRRPLFLAPRWALLRRDL
LNPRRPVLKSKPHLGDVSVERFWPVEPVQKKPRRDGLGPGPGFAQAAFETAPSGPSWGLP
PFEPRWRAGALSPALRRVGAAISMATAASRPCAGGSRDILWRVLGWRIVASIFWSVLLLP
ICTTVFIIFSSIDLFHPIQWLSDSFNDLYSSYVIFYLLLLSVVIVIINIFNVEFYTVVPC
IPCSRLALIGKIVHPQQVMHSFVHASMGMVMAWCAALITKGQYSFLVVPCTGTESSDSPA
AQTCLNEYHLFFLLAGAFMGYTYSLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLVKHSC
VESLFLVRNFCILYYFLGHIPKAWISTAMDLRKDKQLHPLDTVSGLLNLSLLYHVWLCGV
FLLTTWYISWILFKIYATEAHLFPVQPSFAEESDECLPKVLNSNPPLIIKYLALQDLMLL
SQYSPSRRQEVFSLSQPGGHPHNWTAISRECLSLLNDMTQKLILYQEAAATNGRVIPSSY
PMEPKKLNSPEEATFQTPKSGQMTRPSVPLLVKASLFSPKLSTPDVASPLGTPFGSSVMN
RMAGIFDVNTCCGSPQSPQLVRRGPRLWTSASDQQMTEFSNPSLSTSVNAEAKTVGQPSI
IYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFT
EDRFGVVQTTLPAIINSLLTLQEAVDKYFKLPHVSSKPPRISGSLVDTSYKTLRFAFRAS
LKTAIYRITTTFGEHLNAVQTSAEHQKRLQQFLEFKE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaggcacctcgggaagacgtcgactcccagcattctgtacttgggaactccgt
gtcccagaatgcagcgctcctccaactcgttctcagagggccaacgagactacagttccc
agcatgcagcgccgccccctgtttctggcgccccgctgggccctgcttcggagagacctt
ctaaatcccagaaggccggtcctgaagtcaaagccccatctcggggatgtatctgtagaa
cggttctggcccgttgagcctgtccagaagaagcctcggagggatgggttggggcctggg
ccgggcttcgcgcaggcagcgtttgagacagccccatcggggccctcctggggcctacct
ccctttgaaccgcggtggcgggcgggcgctctgtctcctgcactccgtagggtaggggcc
gccatctccatggccacggccgcgagtcggccttgtgccggcgggtcgcgggacatcctg
tggcgcgttttaggctggaggatagttgcaagtattttttggtcagtgctgcttctaccc
atttgtaccacagtatttataatctttagcagtattgatttatttcatcctatacagtgg
ctgtcagattctttcaatgatctatatagttcatatgtaatcttttacctcctccttctg
tcagtggtaatagtgataataaatattttcaatgtggagttttatacagttgtgccttgc
attccctgctccagactggcgctgatagggaagattgttcatcctcagcaggtcatgcac
tcatttgttcatgcttctatgggaatggtgatggcttggtgtgctgcattgataaccaag
ggccagtacagttttcttgtggttccctgcacaggtaccgagagctcagatagccctgct
gcacagacctgcttaaatgaatatcacctttttttcctactggctggagcattcatgggc
tatacctatagccttctgtattttgtcaacaatatgaattatcttccctttcccattata
cagcaatacaaattcttacgctttaggaggtctctgctcttactagttaaacatagttgc
gtggaatcgctattcctggttagaaatttctgcatcttgtattattttctgggccatatt
cccaaagcttggattagcactgctatggaccttcggaaagataagcagttacatcctctt
gacactgtgagtggtctcttgaatctctcattgctctaccatgtctggttgtgtggtgtc
tttcttctaacaacttggtacatctcatggatactcttcaaaatctatgctacagaggct
catctgttccctgttcaaccatcatttgctgaagagtcagatgaatgcctccctaaagtt
ttaaacagcaatcctcccctcatcataaagtatttggccttgcaggacctgatgttgctt
tctcagtattctccttcacgaagacaagaagtttttagtcttagccaaccaggtggacat
ccccacaattggacagccatttcaagggagtgtttgagtcttttaaatgatatgactcag
aaattgattctctaccaagaagctgctgctactaatgggagagtgataccttcatcatac
ccaatggaacctaagaaattgaactctccagaagaagctacttttcagacgccaaaatct
ggccagatgactcggccttcagtgccactgttagttaaagcgtcactgttttctccaaaa
ttatctacacctgatgttgcaagtccccttgggaccccttttggctctagtgtaatgaac
cggatggctggaatttttgatgtaaacacctgctgtgggtcacctcaaagtcctcaacta
gtaagaagagggccaagattatggacttctgcctctgatcagcaaatgactgaattttct
aatccatctctatctacctctgttaatgctgaggctaagacagtgggacagcccagtata
atttattcatggatacagaataaacgtgaacagattaagaacttcttgtcaaaacgggtg
ctgataatgtattttttcagtaagcacccagaggcctccattcaggctgttttttcagat
gcccaaatgcatatttgggcattagaaggtctgtctcacttagtagcagcatcatttaca
gaagatagatttggagttgtccagactacactaccggctattattaatagtttgctgaca
ctgcaagaggcagttgacaagtacttcaagcttcctcatgtttccagtaaaccacctcga
atttcaggaagccttgtggacacttcttacaaaaccttaagatttgcatttagagcgtca
ctaaaaactgccatctatcgaataacgactacttttggtgaacatctgaatgctgtgcaa
acatctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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