Loxodonta africana (African savanna elephant): 100676265
Help
Entry
100676265 CDS
T04351
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04140
Autophagy - animal
lav04211
Longevity regulating pathway
lav05010
Alzheimer disease
lav05014
Amyotrophic lateral sclerosis
lav05016
Huntington disease
lav05017
Spinocerebellar ataxia
lav05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100676265 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
100676265 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100676265 (RB1CC1)
05014 Amyotrophic lateral sclerosis
100676265 (RB1CC1)
05016 Huntington disease
100676265 (RB1CC1)
05017 Spinocerebellar ataxia
100676265 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
100676265 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lav01009
]
100676265 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100676265 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
lav03029
]
100676265 (RB1CC1)
Protein phosphatases and associated proteins [BR:
lav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100676265 (RB1CC1)
Membrane trafficking [BR:
lav04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100676265 (RB1CC1)
Mitochondrial biogenesis [BR:
lav03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100676265 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
UL42
Motif
Other DBs
NCBI-GeneID:
100676265
NCBI-ProteinID:
XP_010597845
LinkDB
All DBs
Position
Unknown
AA seq
1588 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKRSTEP
VLSSETPRTTNRSSLTSFPKSVEDVMPDAADGEGGKEVRESCHTAVQRDGTSVGAKDDDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFLAECRQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKREFFGKL
FRKSFLRNRLFRGLDSWPSSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKTSASQASPQSASSPRTESATG
IAPTTSPSTPPPLTVQGPFCPAVCPLEELSPDSIDAHTFDFETIPHPNTEQTLDQGSLDL
DSLAESPESDFMSAVNEFVIEENSSSPNPVSDPQSPEMMVESLYSSVINAIDSRRMQDTN
VCGKEDSGGHASNVQLEKCRVVAQDSHFSIQTIKEDLCHFRALVQKEQCDFSNSLRGTAV
EIRNIIEKVRCSLEVTLQEKHQRELQTLKNEYEAKLDALIKESEENENKIKKLKGDLVCL
EEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQSCEIKELKESREIALGDL
KKLHVENDEKMQLLRAELQYLEQSHLKELEDTLQVRHTQEFEKVMTEHRVSLEKLKEENQ
HRIDQIQESHATIVQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKLLLEESK
AQQKETLKSLLEQETEGLRTEISKLNQKIQDNNDNHQVGLAELRTLMTIEKDQCISELIS
RHEEESNMLKAELNEVTSLHHQAFEIEKKLKDQIVELQNKVESELSTLEKQNDKKMIQQE
ERYEAIIHKLEKDKEKLIVSQDHDREQLIQKLNSEKEEAIKAALNEFKLGRDAAEKELLE
KVQYLETQLAKSPAREESSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIA
EQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLE
EEVSKLRSSSLLPSPHVAAAPERFGACAPELPGETERSAVETTDEGRLDSAMETSMMSVQ
ENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDL
VLIILDERHDNYVLFTVSPTLYFLHSESLPGLDLKPGEGASGASRRPWVLGKVMEKEYCQ
AKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggtcaatactggaactaccctaacatttgacactgagctt
acagtgcaaactgtggcagaccttaaacatgccattcaaagtaaatacaagattgctatt
cagcaccaggtgctcgtggtcaatggaggagaatgcatggctgcagatcgaagagtgtgc
acgtacagcgctgggacggacacaaatccaatttttctttttaataaagaaatgatctta
tgtgatcgtcccccggctattcctaaaactaccttttcaactgaaaatgacatggaaata
aaagttgaagagtctcttatgatgcctgcagtttttcacactgtagcttcaaggacacaa
cttgcagtggagatgtatgaagttgccaagaaactttgctctttttgtgaaggtctggtt
catgacgaacatcttcaacatcaaggctgggctgctatcatggccaatttggaggactgt
tcaaattcataccaaaagctccttttcaagtttgaaagtatttattcaaattatctgcag
tccatagaagacatcaagttaaaacttactcatttaggaacagcggtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtctgggaagacta
gattctttacctgaacacgaaggctcagaaaaggctgagatgaaaagatccactgaaccg
gtgctctcctctgagacgcctagaacaactaacagatcgtcattaacctcatttcccaag
tcagtggaagatgtcatgccagatgctgcagatggcgaaggtggcaaagaagttagggaa
tcctgtcacactgctgtccagcgtgacggaacttcagtgggtgctaaagatgacgatctg
ccttttttcaatgtttctttattagactggataaatgttcaagatagacctaatgatgtg
gaatctttggtcaggaagtgctttgattccatgagcagacttgacccaaggattattcga
ccatttctagcagagtgccgtcaaactattgccaaacttgataatcagaatatgaaagcc
attaaaggccttgaagataggctttatgccctggaccagatgattgctagctgcagcaga
ctggtgaatgaacaaaaagaacttgctcagggatttttagctaatcagatgagagcagaa
aacttgaaggatgcatctgtattgcctgatttgtgcctgagtcatgcaaatcagttgatg
attatgttgcaaaaccatagaaaactattggatattaaacagaagtgtaccactgccaaa
caagaactagcaaataacctgcatgtcagattgaagtggtgttgctttgtaatgctacat
gctgatcaagatggagagaaattgcaagctttgcttcgccttgtaatagagctattagaa
agagtcaagattgttgaagctcttagtacagttcctcagatgtactgcttagctgttgtt
gaggttgttagaagaaaaatgttcataaaacactacagggagtgggctggtgctttagtc
aaagatggaaagcaattatatgaagctgaaaaatcaaaaagggaattctttgggaaatta
ttcaggaagtctttcttaagaaatcgtctgtttaggggactggactcctggccctcttcc
ttttgtactcaaaagccacgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttcagaagttcagccattcctcagggttccctta
ctttgtgacttcgaacctctacaccagcatgttcttgctctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatcttctgagtgaacaaaagacc
tctgcaagtcaggcatccccacagtctgcttcctcaccaaggacagaaagtgcgacagga
atagcacctactacctcaccgagcacgcctcctcccctcactgttcagggccccttctgc
cctgcagtgtgtcctttagaagaattatctccggacagcattgacgcacacacgtttgat
tttgaaactatcccccatccaaacacagagcaaactcttgaccaaggttccttagacttg
gattcattagcggaaagtcctgaatcagactttatgtctgctgtgaatgagtttgtaatt
gaagaaaattcatcatctcctaatcctgtaagtgacccacagagcccggaaatgatggtg
gagtcactttattcctcagttatcaatgcgatcgatagtaggcgcatgcaggatacaaac
gtgtgtggtaaagaggattcaggaggtcacgcttccaacgtccagttagaaaaatgcagg
gttgttgcccaagactctcacttcagtatacaaaccatcaaggaagacctttgccacttc
agagcattagttcaaaaagagcagtgtgacttctcaaattctctaagaggtacagcagta
gaaataagaaacattattgaaaaagtaaggtgttctctggaagtaacactacaagaaaag
catcaaagagaactacagactttaaaaaatgaatatgaagctaaacttgatgcactgata
aaggagagtgaagaaaatgaaaacaaaattaaaaaattgaaaggagacctagtatgtctt
gaggaggttttgcaaaataaagataatgaatttgctttggttaagcatgaaaaagaagcc
gtcatctgcctgcagaatgaaaaggatcagaaacttttagagatggaaaatataatgcat
acgcaaagttgtgaaattaaagaactgaaggagtcccgagaaatagcgctaggagattta
aaaaagctccatgttgaaaatgatgagaagatgcagttgttgagagcagaacttcagtat
ttagagcaaagtcatcttaaggaattagaggacactctgcaagtcaggcatacacaggag
tttgagaaagttatgacagagcacagagtttctttggagaaattaaaagaggaaaatcaa
cacagaattgatcagatacaagagtctcatgcaacaattgtccaagaaaaagaacaacag
ctacaggaattaaaactcaaggtttctgatttgtctgacatgagatgcaagctggaggtt
gaacttgcattgaaggaagctgaaactgatgagattaaacttttgctggaagaaagcaaa
gcccaacagaaggagaccttaaaatctctccttgaacaagagacagaaggtttgagaaca
gagataagtaagttaaaccagaagattcaggataataatgataatcatcaggtaggctta
gcagagctaagaactttaatgacaattgaaaaagatcagtgtatttcagagctaattagt
agacacgaagaggaatcaaatatgcttaaagctgagttgaatgaagtaacatctttgcat
caccaagcatttgaaatagaaaaaaaactgaaagatcaaatagttgaactacaaaataaa
gtggagtcagaattgagtactcttgaaaaacaaaatgataaaaaaatgattcagcaagaa
gaaagatatgaagctattatccataaacttgaaaaagacaaagaaaaattgatcgtgagc
caggaccacgacagagaacagttaattcagaagcttaattctgaaaaagaagaagccatt
aaggctgctctcaatgaatttaaactggggagagacgctgctgagaaagagttactagaa
aaagttcagtatcttgagactcagttagcaaaaagtcctgccagagaggagtcttcaagt
ttagttgctgaacttcaagaaaagcttcaggaagaaaaagccaaatttctagaacaactt
gaagagcaagaaaaaagaaagaatgaagaaatgcaaaatgttcgaacatctttgattgct
gaacaacagaccaattttaacactgttctaacaagagagaaaatgaggaaagaaaacata
ataaatgatctaagtgataagttgaaaagtacaatgcagcaacaagagcgagataaagat
ttgatagagtcactttctgaagatcgagctcgtttgcttgaggaaaagaaaaaacttgaa
gaagaagtcagtaagttgcgtagtagcagcttgcttccttcaccccatgtagctgcagcc
ccagaacgttttggagcttgtgcacctgaactacctggtgaaacagagagatctgccgtg
gaaaccacagacgaagggagattggattcagcaatggagacgagcatgatgtctgtacaa
gaaaatatccatatgttgtctgaagaaaaacagaggataatgctgttagaacggacattg
cagttgaaagaagaagaaaataagcggttaaatcaaagacttatgtctcagagcatgtct
tcagtatcttcaaggcattctgaaaaaatagccattcgagattttcaggtgggagatttg
gtactcatcatcctagatgaacgccatgacaattacgtgttatttactgttagtcctacc
ttatactttctgcattcagaatctctgcctggcctggacctcaaaccaggtgagggtgct
tcaggtgcatctagaagaccctgggtacttggaaaagtaatggaaaaggaatactgtcaa
gccaagaaggcacaaaacagatttaaagttcctttggggacaaagttctatagagtgaaa
gcagtgtcctggaataagaaagtataa
DBGET
integrated database retrieval system
