KEGG   Loxodonta africana (African savanna elephant): 100676335
Entry
100676335         CDS       T04351                                 
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04148  Efferocytosis
lav04151  PI3K-Akt signaling pathway
lav04510  Focal adhesion
lav04512  ECM-receptor interaction
lav04810  Regulation of actin cytoskeleton
lav04820  Cytoskeleton in muscle cells
lav05165  Human papillomavirus infection
lav05205  Proteoglycans in cancer
lav05410  Hypertrophic cardiomyopathy
lav05412  Arrhythmogenic right ventricular cardiomyopathy
lav05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:lav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100676335 (ITGB5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100676335 (ITGB5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100676335 (ITGB5)
   04148 Efferocytosis
    100676335 (ITGB5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100676335 (ITGB5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100676335 (ITGB5)
   04810 Regulation of actin cytoskeleton
    100676335 (ITGB5)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    100676335 (ITGB5)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100676335 (ITGB5)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    100676335 (ITGB5)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    100676335 (ITGB5)
   05414 Dilated cardiomyopathy
    100676335 (ITGB5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lav04131]
    100676335 (ITGB5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lav04515]
    100676335 (ITGB5)
Membrane trafficking [BR:lav04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    100676335 (ITGB5)
Cell adhesion molecules [BR:lav04515]
 Integrins
  Integrin beta subunits
   100676335 (ITGB5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin I-EGF_1 EGF_2 EGF_Teneurin EGF_TEN vWA_SIBA-E SCO4226-like
Other DBs
NCBI-GeneID: 100676335
NCBI-ProteinID: XP_010591201
LinkDB
Position
Unknown
AA seq 692 aa
MTPQEVAVNLRPGDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRNLGTKLAEEM
RKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPNCVPSFGFRHLLPLTDRVD
SFNEEVRKQRVSRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVYTTDDVPHIALDGK
LGGLVQPHDGQCHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNF
TALIPGTTVEILHGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYP
GQRKCEGLKIGDTATFDVSVEARSCPGRQVEQRFTLRPVGFRDTLEVGVAYSCTCGCSAR
LEPDSTRCSGNGTYVCGLCECNPGYLGTRCECQEGENQSGYQNLCREAEGKPLCSGRGEC
SCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECRCHAGYIGDNCNCS
TGISSCQAKDGQICSDRGHCVCGQCQCTEPGAFGETCEKCPTCPDACSTKRDCVECLLLH
SGKPAGNQTCHNYCKDEVITWVDTIVKDDQEAVLCFYKTAQDCVMMFTYTELPSGKTNLT
VLKEPECGSAPNAMTILLAVVGSILLIGIALLAIWKLLVTIHDRREFAKFQSERSRARYE
MASNPLYRKPISTHTVDFTFNKFNKSYNGTVD
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgacgccacaggaggtggcggtgaaccttcggccaggtgacaagactacctttcagctg
caggttcgacaagtggaggattatcctgtggacttgtactacctcatggacctctccctg
tccatgaaggatgacttggacaacatccgaaacctgggcaccaagctcgctgaggagatg
aggaagcttaccagcaatttccgattggggtttggctctttcgtagacaagaacatctcc
cctttctcctatacagcgccgaggtaccagaacaatccatgcattggttacaagttattt
ccaaactgcgtcccatcctttgggttccgccatctgctgcctcttacagacagagttgac
agcttcaacgaggaagtacggaaacagagggtgtcccggaaccgagatgccccagagggg
ggctttgacgcagtcctccaggcagctgtctgcaaggagaagattggttggcgaaaggat
gcactacacttgctggtgtacacaacagatgacgtgccacacatcgcactggacggaaaa
ctgggcggcctggtgcagccgcatgatggccagtgccacctgaatgaggccaacgaatat
accgcatccaaccagatggactatccatcccttgctttgcttggagagaagttagcagag
aacaacatcaacctcatctttgcagtgacaaaaaaccattatatgctctacaagaatttt
acagccctgatacctggaacaacagtggagattttacatggagactccaaaaatatcatt
cagctgattatcaatgcgtacaatagtattcggtctaaagtggagctgtcagtctgggat
cagcctgaggatctcaacctcttcttcactgctacctgccaagacggtgtatcctaccct
ggtcagaggaagtgtgaaggcctcaaaatcggggacacggcgacctttgatgtgtcagtg
gaggcccggagctgccccggcagacaggtggagcagaggttcaccctgcggcccgtgggg
ttccgggacaccctggaggtgggggtcgcctacagctgcacgtgtggctgcagcgcccgg
ctggagccagacagcaccagatgcagcggcaatgggacttacgtttgcggcctgtgcgag
tgcaaccccggctacctgggcaccaggtgcgagtgccaggaaggggagaaccagagcggg
taccagaacctgtgccgggaggccgaggggaagcccctgtgcagtgggcgcggggagtgc
agctgcaaccagtgctcctgctttgagagcgagttcgggaagatctacgggcctttctgt
gagtgcgacaacttctcctgtgccaggaacaagggagtcctctgctcaggccacggcgag
tgccactgtggagagtgcaggtgccacgcaggttacatcggggacaactgtaactgctcg
acgggcatcagctcgtgccaggccaaggacggccagatctgcagcgaccgtgggcactgc
gtctgtgggcagtgccagtgcacggagccgggagcctttggggagacgtgtgagaagtgc
ccgacctgccccgatgcctgcagtactaagagagattgtgtcgagtgcttgctgcttcac
tcagggaaaccagctggcaaccagacgtgccacaactattgcaaggatgaggtgatcacg
tgggtggacaccattgtgaaagatgaccaggaagctgtgctttgtttctacaaaactgcc
caagactgtgtcatgatgttcacctatacggagctccccagtgggaagaccaacctgacg
gtcctcaaggagccagagtgtggatctgcacccaacgccatgactatcctgctggccgtg
gttggcagtatcctcctgattgggattgcgctcctggccatctggaagctgctcgtcacc
atccacgaccgaagagagtttgcaaagttccagagtgagcgatccagggcccgctatgaa
atggcttcaaaccctctgtatagaaagcccatctccacacacaccgtggacttcaccttc
aacaagttcaacaagtcctacaatggcacggtggactga

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