KEGG   Loxodonta africana (African savanna elephant): 100676342
Entry
100676342         CDS       T04351                                 
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
lav  Loxodonta africana (African savanna elephant)
Brite
KEGG Orthology (KO) [BR:lav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lav03009]
    100676342 (NLE1)
Ribosome biogenesis [BR:lav03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    100676342 (NLE1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 DSE1_N Beta-prop_Aladin ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_SCAP ASA1 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR41 NLE CFAP251_N PAC11 Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_SPT8 Tricorn_2nd TRM82_WD eIF2A RMC1_N Beta-prop_RIG_1st Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Ge1_WD40 PD40 Beta-prop_NWD2_C DNAI3_WD Cytochrom_D1
Other DBs
NCBI-GeneID: 100676342
NCBI-ProteinID: XP_010592538
LinkDB
Position
Unknown
AA seq 488 aa
MAAAAVAVSGEEAARDVQRLLVQFQDEGGQLLGAPFDVPVDITPDKLQLVCNALLAQEDP
LPLAFYIHDAEIVSSLGKTLESQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHSEAV
ISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKN
GQILLWDPSTGKQEGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRVWDTTAGR
CERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALST
DYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWS
PAEDKKPLARMTGHQALINQVLFSPDSRLIASASFDKSIKLWDGRTGKYLASLRGHVAAV
YQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKD
KCLRIWRR
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggtggcggtgtcgggcgaggaggcggctcgcgacgtgcagcggctg
ctggtgcagttccaggatgagggggggcagctgctgggcgccccgttcgacgtgcccgtg
gacatcaccccggacaagctgcagctcgtgtgcaacgcgctgctggcccaggaggatccc
ctgccactggctttctacatccacgatgccgagattgtctcctcactggggaagacgctg
gagtcgcaggctgtggagacggagaaggtcctcgacatcatctatcagcctcaggctgtc
ttcagggtccgggccgtgacccgctgcaccagctccttggagggtcacagtgaggcggtc
atttctgtggctttcagccccactgggaagtacctggccagtggctctggggacaccact
gtgcgcttctgggatctcagcaccgagacaccgcatttcacttgcaagggacacagacac
tgggtccttagcatatcctggtccccagatggcaagaagctggcctccggctgcaagaat
ggccagattctcctgtgggacccaagcacagggaagcaagagggcaggacccttgcgggc
cacagcaagtggatcacaggcctgagctgggagcccctccatgcgaaccccgagtgccgc
tacgtggccagcagctccaaggacggcagcgtgcgggtgtgggatacgaccgcgggccgg
tgtgagcgcatcctcactgggcacacccagtcagtcacctgcctccggtggggaggggac
gggcttctctactctgcctcccaggaccgcaccatcaaagtctggagagctcacgatggg
gtgctgtgccggactctgcaaggccacggccactgggtgaacaccatggcgctcagcact
gactacgcgctgcgcacaggagcctttgagccagccgaagcctcagtcaatgcccaagac
ctcagagggtccttgcaggagttgaaggagagggctctgagccggtacaaccttgtgcgg
ggccagggcccagagaggctggtgtctggctcagatgacttcaccctattcctgtggtcg
ccagcagaggacaagaagccccttgcacggatgacgggacaccaggccctcatcaaccag
gtgctcttctcccctgattcccgtctcattgccagcgcctccttcgacaagtccatcaag
ctgtgggatggcaggaccggcaagtacctggcttccttgcggggccatgtggcagctgtg
taccagattgcctggtcagccgacagccgactcctggtcagcggcagcagtgacagcaca
ctgaaggtgtgggacgtgaaggcccagaagctggccacagacctgcctggccatgccgac
gaggtatatgctgttgactggagtccagatggccagagagtagcaagtggtgggaaggac
aagtgcctccggatatggaggcgatga

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