Loxodonta africana (African savanna elephant): 100676443
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Entry
100676443 CDS
T04351
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100676443 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100676443 (DHX36)
03012 Translation factors [BR:
lav03012
]
100676443 (DHX36)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100676443 (DHX36)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100676443 (DHX36)
Translation factors [BR:
lav03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100676443 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
AAA_19
nSTAND3
AAA_14
PhoH
ATPase
NACHT
DUF6782
NPHP3_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
100676443
NCBI-ProteinID:
XP_003416188
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MSSDYSQSWGRDGCPRSSGGGFGGGRGGGHGGSRGAGGGGGGGGGGGGGRGGRGRHPGHL
KGRQIGLWYARLQGQKNKEAERQERAVVHMDEHREERIVQLLNSVQAKNDKDSEAQISWF
APEDHGQNTEVPAENKPSSEKKLEDQEKKLINQEKKPFRSRDRSYMDRDSEYLLQENEPD
ITLDRQLLEDLQRKKTEPRYIEMQHFREKLPSHGMQKELVSLIANHQVTVISGETGCGKT
TQVTQFILDDYIKQGKGSACRIVCTQPRRISAISVAERVAAERAEPCGNGNSTGYQIRLQ
SRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHMVLDEIHERNLQSDVLMTVIKDLLTSR
PDLKVILMSATLNAEKFSEYFGHCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEPRSQ
FRRGFMQGRVSRQEKEGKEAIYEERWPDYVRELRGRYSARTVDVLEMMDDDKVDLNLIAA
LIRHIVLEEEDGAILVFLPGWDNISSLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVF
KKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAK
QRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLRR
LMDPPSNEAVLLSIKHLIELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDP
VLTIAASLSFKDPFVIPLGKEKIADARRKELAKGSRSDHLTVVNAFKGWEEARRRGFRYE
KDYCWEYFLSSNTLQMLHSMKAQFAEHLLGAGFVGGRNPKDPDSNINSDNEKIIKAVICA
GLYPKVAKIRPNLGKKRKMVKVYTKSDGLVAIHPKSVNVEQTDFHYNWLIYHLKMRTSSI
YLYDCTEVSPYCLLFFGGDISIQKDDDQETIAVDEWIVFQSPARIAHLVKELRKELDVLL
QEKIESPHPVDWNDTKCRDCAVLSAIIDLIKTQEKAMPRNFPPRYQDGCYS
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgactattctcagagctggggccgcgatggctgtccccgcagctccggcggg
ggctttggagggggccgtggagggggccacggagggagccgaggtgccggcggcggcggc
ggcggcgggggcggcggagggggcggtcgaggcggccggggccggcatcccgggcacctg
aagggccgccagatcggcttgtggtacgccaggttgcaggggcagaagaacaaggaggcg
gagaggcaggagagagctgtcgtacacatggatgaacatcgagaagagcggattgtgcag
ctgctgaattccgtccaagctaagaatgataaagattcggaagcacagatatcctggttt
gctcctgaggatcatggtcaaaatactgaagttcctgctgagaacaaaccaagctcagag
aagaaacttgaggaccaggaaaagaaactgatcaaccaagaaaaaaagccctttagaagc
agggacagatcatacatggaccgagattctgagtacctcttgcaagaaaatgagccggat
ataaccttagaccgacagctgttggaagatttacagaggaaaaagacggagcctcggtat
atcgaaatgcagcatttccgggaaaagctgccttcacatggaatgcaaaaggagttggtc
agcctgattgcgaaccaccaggtgacagtgataagtggtgaaactggctgtggaaagacc
actcaggtcactcagttcatcctggatgactacatcaaacagggaaaagggtctgcgtgc
aggatcgtgtgtacccagccgagaaggatcagtgccatctcagttgcggagcgagtggct
gcagaaagggcagagccttgtggcaatggtaacagtactggataccaaattcgtctccag
agtcggttgccgaggaaacagggttccatcctgtactgcacgacaggaatcatccttcag
tggctccagtcagacccgcatttgtccagtgtcagccacatggtcctagatgaaatccac
gaacgaaatctacagtcagatgtcttaatgacggttattaaagatcttctcacttctcga
cctgacctgaaagtaatactgatgagtgccacattgaatgctgagaaattttcagaatat
tttggtcactgtccaatgatacatatacctggttttacttttcctgttgtggagtatctt
ttggaagatataattgaaaaaataagatacgttccggaacagaaagaacccagatcccag
tttaggaggggattcatgcaagggcgtgtcagcagacaagaaaaagaagggaaggaggcc
atctacgaagagcgctggccagattacgtcagggagctgcgaggaaggtattctgcaagg
actgtagatgttttagaaatgatggatgatgataaagtggatctgaacttgattgctgcc
cttatccgacacatcgttttggaagaagaggatggtgcaatactggtatttctgccaggc
tgggacaatatcagcagtttacacgacctcttgatgtcacaagtgatgtttaaatcagat
aagtttcttattatacctttacattcactgatgcctacggttaaccagacacaggtgttt
aaaaaaacccctcctggtgttcggaaaatagtgatcgctaccaatattgcagagacaagc
attaccatagatgatgtagtttatgtgatagatggaggaaaaataaaagagacacacttt
gacactcagaacaacatcagtacaatgtctgccgagtgggtcagtaaagctaatgccaag
caaaggaaaggccgagctggaagagtccaacctggtcattgctatcatctctacaatggc
cttagagccagccttctagatgactatcagttgccagaaattctgagaactcctttggaa
gaactttgtttacagataaagattttaaggctaggtggaattgcttattttctgaggaga
ttaatggatccaccatcaaatgaggcagtactgctctccataaaacacctgatagaactg
aacgctctggataaacaagaagaattgacacctcttggagtccacttagcacgcttacca
gttgagccacatattggaaaaatgattctgtttggagccctgttctgctgcctggaccca
gtactcaccattgctgccagcctcagcttcaaggacccctttgtcattccattgggaaaa
gaaaagatcgcggatgcgagaagaaaagagttggccaagggttctagaagcgaccacctg
acagttgtgaatgcatttaagggctgggaagaagccaggcggcgtggtttcagatacgag
aaggactattgctgggagtattttctgtcttcaaacacactgcagatgctgcacagcatg
aaggcgcagtttgccgagcacctcctgggagcggggtttgttggcggcaggaaccctaaa
gatcccgactcgaacataaactcagataatgagaagataattaaagctgttatctgtgct
ggtttataccccaaagttgctaaaatccgaccaaatttgggtaaaaaaagaaaaatggtc
aaagtgtacacaaaaagtgatggattggttgccattcaccctaagtctgttaatgtggag
cagacagactttcactacaactggcttatctatcacctgaagatgagaacaagtagtata
tacttgtatgactgcacagaggtctccccgtactgcctcctgttctttggaggtgatatt
tccatccagaaggatgatgatcaagaaaccattgctgtagatgaatggattgtctttcag
tctccagcaagaattgcccatcttgttaaggaattaagaaaggagctcgatgtccttctg
caagaaaagattgagagtccgcatcctgtggactggaacgacaccaaatgcagagactgt
gcggtgctgtctgccatcatagacttgatcaagacgcaggaaaaagcaatgccaagaaac
tttccaccacgataccaggatgggtgttacagctga
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